Detailed information NTG1121285

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: EL136_RS07635
• Genome accession: NZ_LR134317
• Coordinates: 1609798..1610844 (-)
• Length: 348 a.a.
• NCBI ID: WP_154804144.1
• Uniprot ID: A0A7Z8ZXG4
• Organism: Streptococcus equi subsp. zooepidemicus strain NCTC6180
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1604798..1615844

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL136_RS07620 (NCTC6180_01562)	-	1606300..1606530 (+)	231	WP_154804142.1	DNA-dependent RNA polymerase subunit epsilon	-
EL136_RS07625 (NCTC6180_01563)	rnjA	1606532..1608214 (+)	1683	WP_154804143.1	ribonuclease J1	-
EL136_RS07630 (NCTC6180_01564)	amiF	1608863..1609798 (-)	936	WP_021320349.1	ABC transporter ATP-binding protein	Regulator
EL136_RS07635 (NCTC6180_01565)	oppD	1609798..1610844 (-)	1047	WP_154804144.1	ABC transporter ATP-binding protein	Regulator
EL136_RS07640 (NCTC6180_01566)	-	1610857..1611888 (-)	1032	WP_021320347.1	ABC transporter permease	-
EL136_RS07645 (NCTC6180_01567)	-	1611898..1612812 (-)	915	WP_012514937.1	ABC transporter permease	-
EL136_RS07650 (NCTC6180_01568)	-	1612979..1614637 (-)	1659	WP_037580359.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38526.42 Da
• Isoelectric Point: 6.5059

>NTDB_id=1121285 EL136_RS07635 WP_154804144.1 1609798..1610844(-) (oppD) [Streptococcus equi subsp. zooepidemicus strain NCTC6180]
MTNETILSVKNLHVDFKTYAGDVKAIRDISFELKKGETLAIVGESGSGKSVTTRTLMGLNAKNASISGDICFKGKQLNEL
KEEEWVKVRGNEIAMIFQDPMTSLDPTMTIGMQIAEAIMIHQSIHKTEALKRALDLMRQVGIPNAEEHLKDYPHQWSGGM
RQRAVIAIALAANPDILIADEPTTALDVTIQAQILKLMKDIQSQTASSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYHPQHPYTWGLLNSMPTTATAAGSLRSIPGTPPDLLNPPKGDAFAARNEFALDIDHIKEPPMFKVSDSHYAATWLL
DERAPKITPPLPIRKRWAKWQEMEERKA

Nucleotide

• Length: 1047 bp

>NTDB_id=1121285 EL136_RS07635 WP_154804144.1 1609798..1610844(-) (oppD) [Streptococcus equi subsp. zooepidemicus strain NCTC6180]
ATGACGAATGAAACCATTTTAAGTGTCAAAAACCTCCATGTTGATTTTAAAACCTATGCTGGAGATGTTAAGGCGATTCG
TGATATCAGCTTTGAGCTAAAAAAGGGAGAGACTCTTGCTATTGTGGGAGAATCAGGCTCAGGGAAATCTGTAACCACTC
GCACGCTGATGGGGTTGAATGCTAAGAATGCAAGTATTTCTGGAGACATTTGCTTCAAGGGCAAGCAGCTCAATGAGCTG
AAGGAGGAGGAATGGGTGAAGGTGCGTGGCAATGAAATTGCGATGATCTTCCAGGATCCGATGACCAGCCTTGATCCTAC
CATGACAATTGGCATGCAGATTGCAGAGGCAATAATGATTCATCAAAGCATTCATAAGACAGAAGCCTTGAAGCGTGCTT
TAGACCTGATGCGTCAGGTTGGTATCCCAAATGCTGAGGAGCACCTTAAGGATTACCCACATCAGTGGTCTGGGGGCATG
CGGCAACGGGCTGTTATTGCCATTGCTCTAGCTGCCAATCCTGATATTTTGATTGCAGATGAGCCGACAACAGCCCTTGA
TGTTACCATTCAGGCCCAGATTTTGAAGCTGATGAAAGATATTCAGTCTCAGACCGCATCATCGATTATCTTTATTACGC
ATGACCTTGGTGTTGTTGCTGGAATGGCAGATCGCGTTGCTGTCATGTATGCTGGAAAAATTGTTGAATATGGAACGGTT
GATGAGGTATTTTACCACCCGCAGCACCCTTATACCTGGGGATTGCTCAATTCGATGCCTACAACAGCTACTGCAGCAGG
TAGCTTGAGGTCTATTCCCGGAACGCCACCAGATTTATTAAACCCTCCAAAGGGTGATGCATTTGCTGCCCGGAATGAGT
TTGCCCTAGACATTGACCATATCAAAGAGCCTCCAATGTTCAAGGTAAGTGACAGCCATTACGCGGCAACCTGGCTGCTA
GATGAGCGCGCTCCTAAAATAACCCCTCCATTACCAATCCGCAAGCGTTGGGCAAAATGGCAGGAAATGGAAGAGAGGAA
GGCTTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

3D structure

• AlphaFold DB: A0A7Z8ZXG4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	79.827	99.713	0.796
amiE	Streptococcus salivarius strain HSISS4	56.325	95.402	0.537
amiE	Streptococcus thermophilus LMG 18311	56.325	95.402	0.537
amiE	Streptococcus thermophilus LMD-9	56.325	95.402	0.537