Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   EL136_RS01620 Genome accession   NZ_LR134317
Coordinates   329680..330489 (+) Length   269 a.a.
NCBI ID   WP_043052256.1    Uniprot ID   A0A7Z8ZTT4
Organism   Streptococcus equi subsp. zooepidemicus strain NCTC6180     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 324680..335489
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL136_RS01600 (NCTC6180_00328) - 325089..326351 (+) 1263 WP_043040863.1 AMP-binding protein -
  EL136_RS01605 (NCTC6180_00329) - 326396..327412 (+) 1017 WP_012677634.1 DUF3114 domain-containing protein -
  EL136_RS01610 (NCTC6180_00330) vicR 327621..328331 (+) 711 WP_154803663.1 response regulator YycF Regulator
  EL136_RS01615 (NCTC6180_00331) vicK 328324..329676 (+) 1353 WP_012677636.1 cell wall metabolism sensor histidine kinase VicK Regulator
  EL136_RS01620 (NCTC6180_00332) vicX 329680..330489 (+) 810 WP_043052256.1 MBL fold metallo-hydrolase Regulator
  EL136_RS01625 (NCTC6180_00333) - 331401..332915 (+) 1515 WP_043039170.1 helix-turn-helix domain-containing protein -
  EL136_RS01630 (NCTC6180_00334) rnc 333173..333865 (+) 693 WP_042671147.1 ribonuclease III -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29953.04 Da        Isoelectric Point: 5.7427

>NTDB_id=1121263 EL136_RS01620 WP_043052256.1 329680..330489(+) (vicX) [Streptococcus equi subsp. zooepidemicus strain NCTC6180]
MSEVGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRRPEDLDAILITHEHSDHIKGVGIMARKYNLD
VYANEKTWQMIDERHMIGNLDVTQKHVFERGKTMTFGDIDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRLAG
IIANADGYLIESNHDVEILRAGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGNKTKKIYLGHLSQENNIKELAHMTMVN
QLAMADLGVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1121263 EL136_RS01620 WP_043052256.1 329680..330489(+) (vicX) [Streptococcus equi subsp. zooepidemicus strain NCTC6180]
ATGAGTGAGGTTGGCTTTAAATATAGTATTTTAGCATCAGGATCGACAGGGAACTGCTTTTACTTGGAAACGCCCAAGAA
GCGGTTGTTGATTGATGCAGGACTGACTGGCAAGAAAATCACCAGTCTCCTTGCTGAGATTGACAGAAGGCCTGAGGATT
TGGATGCTATCTTGATTACCCACGAGCATTCCGACCATATCAAGGGTGTTGGAATCATGGCTCGAAAATATAACCTAGAT
GTCTATGCCAATGAAAAGACTTGGCAGATGATTGATGAGCGTCATATGATTGGCAACCTAGACGTCACACAAAAGCATGT
CTTTGAAAGAGGTAAGACCATGACCTTTGGAGACATTGACATTGAGAGCTTTGGTGTTAGTCATGACGCTGTAGACCCAC
AGTTTTACCGCATTATGAAGGATAACAAGTCCTTTGTCATGCTGACGGATACAGGATATGTGAGTGACCGCTTGGCCGGA
ATCATTGCAAATGCTGATGGCTACTTGATTGAGTCAAATCACGATGTAGAGATATTGCGAGCCGGCTCATACCCTTGGAG
CCTAAAGCAGCGAATCTTATCTGATCTAGGGCATTTATCCAATGAAGATGGTGCTGGCGCTATGATTCGAAGCTTGGGCA
ATAAAACAAAGAAAATCTACCTCGGTCACCTAAGCCAGGAGAACAATATCAAAGAATTAGCCCACATGACAATGGTCAAT
CAGCTAGCAATGGCAGATTTAGGTGTTGGAACAGATTTTACTGTTCATGATACCTCACCAGATACCGCCTGCCCCTTGAC
AGACATCTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Z8ZTT4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

74.721

100

0.747

Multiple sequence alignment