Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   EL139_RS03355 Genome accession   NZ_LR134316
Coordinates   614044..614817 (-) Length   257 a.a.
NCBI ID   WP_111717871.1    Uniprot ID   A0A9X8T162
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NCTC6181     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 609044..619817
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL139_RS03330 (NCTC6181_00679) - 609203..610378 (+) 1176 WP_111714632.1 IS256-like element ISSdy3 family transposase -
  EL139_RS03335 (NCTC6181_00680) - 610412..610768 (-) 357 WP_111714630.1 helix-turn-helix transcriptional regulator -
  EL139_RS03340 (NCTC6181_00681) - 610893..611090 (-) 198 WP_111714627.1 DUF951 family protein -
  EL139_RS03345 (NCTC6181_00682) dnaN 611164..612300 (-) 1137 WP_111714625.1 DNA polymerase III subunit beta -
  EL139_RS03350 (NCTC6181_00683) dnaA 612454..613809 (-) 1356 WP_111714622.1 chromosomal replication initiator protein DnaA -
  EL139_RS03355 (NCTC6181_00684) spo0J 614044..614817 (-) 774 WP_111717871.1 ParB/RepB/Spo0J family partition protein Regulator
  EL139_RS03360 (NCTC6181_00685) htrA 614934..616154 (-) 1221 WP_111717869.1 trypsin-like peptidase domain-containing protein Regulator
  EL139_RS03365 (NCTC6181_00686) rlmH 616364..616843 (+) 480 WP_111717867.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  EL139_RS03370 (NCTC6181_00687) - 616923..618364 (-) 1442 Protein_622 IS1182 family transposase -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 28910.61 Da        Isoelectric Point: 9.7853

>NTDB_id=1121214 EL139_RS03355 WP_111717871.1 614044..614817(-) (spo0J) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC6181]
MTELLKSIPIEDIVANPYQPRLQFNQKELEDLANSIKANGLIQPIIVRKSDIFGYELVAGERRFKASKMAGLTKVPAIVK
NMSSLESMQQAIVENLQRADLNPIEEAKAYQLLIEKNQMTHEEIAKYMGKSRPYISNTLRLLQLPQTISKAVEEGDISAG
HARALLTLTDEKEQLVYANRIKNEGLSVRQIEHMVTPKLKTTPTPKNKNIFITSLEDQLAQSLGLPAKIKLKSTQSGQLL
LPFANQEELNRIINKLL

Nucleotide


Download         Length: 774 bp        

>NTDB_id=1121214 EL139_RS03355 WP_111717871.1 614044..614817(-) (spo0J) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC6181]
ATGACTGAACTATTGAAATCTATTCCAATTGAAGATATCGTAGCCAATCCCTATCAACCAAGGCTGCAGTTTAATCAAAA
GGAACTAGAAGATTTGGCTAATTCAATCAAGGCAAATGGACTTATTCAACCTATTATTGTTCGAAAATCTGACATCTTTG
GTTATGAATTAGTTGCAGGAGAACGACGCTTTAAGGCTTCTAAAATGGCTGGGCTAACAAAGGTACCTGCTATTGTCAAA
AACATGTCCTCTCTGGAAAGTATGCAACAAGCTATCGTAGAAAATTTACAACGGGCTGATTTAAATCCCATTGAAGAAGC
AAAAGCTTATCAGCTACTGATTGAAAAAAATCAAATGACGCATGAAGAGATTGCTAAATATATGGGAAAATCAAGACCTT
ATATTAGCAATACTTTACGCCTACTGCAACTTCCGCAAACAATTAGTAAAGCAGTAGAAGAAGGAGACATTAGTGCAGGA
CACGCGCGTGCTCTTCTCACACTAACCGACGAAAAGGAACAGTTAGTTTACGCTAATAGAATCAAAAATGAAGGGTTAAG
TGTACGACAAATTGAGCATATGGTAACTCCAAAACTCAAAACCACCCCTACCCCAAAAAATAAAAATATTTTTATCACTT
CTTTAGAAGATCAGCTGGCCCAATCTCTAGGGCTACCAGCCAAAATCAAATTGAAATCAACTCAGAGTGGTCAATTGCTG
TTACCATTTGCTAATCAAGAGGAATTAAACAGAATTATCAACAAGTTGCTTTAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-95)

HTH domain found in ParB protein (HTH_ParB)

(147-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.203

99.611

0.58

Multiple sequence alignment