Detailed information NTG1121199

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: EL139_RS01360
• Genome accession: NZ_LR134316
• Coordinates: 237047..237973 (-)
• Length: 308 a.a.
• NCBI ID: WP_003049687.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain NCTC6181
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 232047..242973

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL139_RS01350 (NCTC6181_00278)	amiF	235052..235975 (-)	924	WP_003057816.1	ABC transporter ATP-binding protein	Regulator
EL139_RS01355 (NCTC6181_00279)	amiE	235968..237038 (-)	1071	WP_111715184.1	ABC transporter ATP-binding protein	Regulator
EL139_RS01360 (NCTC6181_00280)	amiD	237047..237973 (-)	927	WP_003049687.1	oligopeptide ABC transporter permease OppC	Regulator
EL139_RS01365 (NCTC6181_00281)	amiC	237973..239475 (-)	1503	WP_111715181.1	ABC transporter permease	Regulator
EL139_RS01370 (NCTC6181_00282)	amiA	239541..241511 (-)	1971	WP_111715178.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34888.93 Da
• Isoelectric Point: 9.2024

>NTDB_id=1121199 EL139_RS01360 WP_003049687.1 237047..237973(-) (amiD) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC6181]
METIDKSKFRFVERDSRASEVIDTPAYSYWKSVFRQFFSKKSTIFMLMILVTILLMSFIYPMFANYDFGDVSNINDFSKR
YIWPNAEYWFGTDKNGQSLFDGVWYGARNSILISVIATLINVTIGVILGAIWGVSKAFDKVMIEIYNVISNIPSMLIIIV
LTYSLGAGFWNLILAFCITGWIGVAYSIRVQILRYRDLEYNLASQTLGTPMYKIAIKNLLPQLVSVIMTMLSQMLPVYVS
SEAFLSFFGIGLPTTTPSLGRLIANYSSNLTTNAYLFWIPLVTLILVSLPLYIVGQNLADASDPRSHR

Nucleotide

• Length: 927 bp

>NTDB_id=1121199 EL139_RS01360 WP_003049687.1 237047..237973(-) (amiD) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC6181]
ATGGAAACGATTGATAAATCAAAATTTCGATTTGTTGAGCGCGATAGCAGAGCCTCCGAAGTGATTGATACCCCTGCTTA
TTCTTATTGGAAATCCGTATTCCGTCAATTTTTCTCTAAAAAGTCTACTATCTTCATGCTAATGATTTTAGTGACCATCT
TATTGATGAGTTTTATTTACCCAATGTTTGCGAATTATGACTTTGGTGATGTGAGTAATATCAACGATTTCTCGAAACGT
TATATTTGGCCCAACGCCGAATACTGGTTTGGAACAGATAAAAACGGACAATCTTTGTTTGATGGTGTCTGGTATGGAGC
GCGTAACTCTATCCTAATTTCTGTTATAGCAACATTGATTAATGTGACTATTGGAGTTATTTTAGGAGCTATTTGGGGAG
TTTCTAAAGCATTTGATAAAGTTATGATTGAGATTTATAATGTCATCTCAAACATTCCTTCAATGTTAATTATCATTGTT
TTGACCTATTCATTAGGTGCTGGTTTTTGGAATTTGATTTTAGCTTTCTGTATCACTGGATGGATCGGTGTAGCTTACTC
TATCCGTGTGCAAATCTTACGTTACCGTGATTTGGAGTACAACCTTGCTAGCCAAACCCTAGGAACACCAATGTACAAAA
TTGCCATTAAGAACCTCTTGCCTCAATTGGTTTCAGTTATCATGACCATGTTGTCACAAATGTTACCAGTGTACGTGTCT
TCTGAGGCTTTCTTATCCTTCTTTGGGATTGGTTTACCAACCACGACTCCAAGCTTAGGGCGTTTGATTGCTAATTATTC
TAGCAACTTAACAACAAATGCTTACCTCTTCTGGATTCCCTTAGTAACGTTGATTTTAGTATCATTACCATTGTATATTG
TCGGACAAAACCTGGCAGATGCCAGCGACCCACGTTCACATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-72)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-305)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	73.052	100	0.731
amiD	Streptococcus thermophilus LMG 18311	73.052	100	0.731
amiD	Streptococcus thermophilus LMD-9	73.052	100	0.731