Detailed information NTG1121197

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: EL139_RS01350
• Genome accession: NZ_LR134316
• Coordinates: 235052..235975 (-)
• Length: 307 a.a.
• NCBI ID: WP_003057816.1
• Uniprot ID: A0A9X8T611
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain NCTC6181
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 230052..240975

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL139_RS01350 (NCTC6181_00278)	amiF	235052..235975 (-)	924	WP_003057816.1	ABC transporter ATP-binding protein	Regulator
EL139_RS01355 (NCTC6181_00279)	amiE	235968..237038 (-)	1071	WP_111715184.1	ABC transporter ATP-binding protein	Regulator
EL139_RS01360 (NCTC6181_00280)	amiD	237047..237973 (-)	927	WP_003049687.1	oligopeptide ABC transporter permease OppC	Regulator
EL139_RS01365 (NCTC6181_00281)	amiC	237973..239475 (-)	1503	WP_111715181.1	ABC transporter permease	Regulator

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34796.93 Da
• Isoelectric Point: 6.4058

>NTDB_id=1121197 EL139_RS01350 WP_003057816.1 235052..235975(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC6181]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGDILYDGKVINRRKSKS
ESNELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKNMMAEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
NPIHPYTKSLLSAVPIPDPILERQKELIVYNPEQHDYTEDKPTMVEIKPNHFVWANQAEVEKYKAEQ

Nucleotide

• Length: 924 bp

>NTDB_id=1121197 EL139_RS01350 WP_003057816.1 235052..235975(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC6181]
ATGTCTGAGAAATTAGTCGAAGTTAAAGACCTAGAAATTTCCTTCGGAGAGGGAAAGAAAAAATTTGTTGCGGTTAAAAA
TGCCAATTTCTTTATCAAAAAAGGTGAAACTTTCTCTTTAGTTGGAGAATCTGGAAGTGGTAAAACAACAATTGGTCGTG
CTATTATTGGTTTGAATGATACCAGTTCTGGCGACATCCTTTATGATGGAAAAGTTATCAATCGAAGAAAGTCAAAATCA
GAATCAAATGAGCTCATTCGTAAGATTCAAATGATTTTCCAAGACCCTGCAGCTAGTCTGAATGAACGTGCAACTGTTGA
CTATATCATTTCAGAAGGTCTTTATAATTTTAATCTGTTCAAAACAGAAGAAGAGCGTAAAGAAAAAATTAAGAACATGA
TGGCCGAGGTTGGTTTGTTATCAGAACATTTGACTCGCTATCCTCACGAATTTTCAGGAGGGCAACGTCAACGGATTGGT
ATCGCTAGAGCTCTAGTGATGAATCCCGAGTTTGTTATTGCTGACGAACCTATCTCCGCTCTAGACGTTTCTGTTCGAGC
ACAGGTCTTGAATCTTCTTAAAAGAATGCAAGCCGAAAAAGGACTGACATATCTTTTCATCGCCCACGACCTATCAGTTG
TTCGCTTCATTTCAGATCGTATTGCGGTTATCCATAAAGGTGTTATTGTGGAGGTTGCTGAAACAGAAGAGCTGTTCAAT
AATCCTATCCACCCGTATACAAAATCTCTTTTATCAGCTGTTCCGATTCCAGATCCAATATTGGAACGTCAAAAAGAGCT
TATTGTCTATAATCCAGAGCAACATGACTATACAGAAGATAAACCAACGATGGTTGAAATTAAGCCAAATCACTTTGTCT
GGGCTAATCAAGCAGAAGTTGAAAAGTATAAAGCAGAACAATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

• ABC transporter (ABC_tran) (25-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	81.759	100	0.818
amiF	Streptococcus thermophilus LMD-9	81.433	100	0.814
amiF	Streptococcus salivarius strain HSISS4	81.433	100	0.814