Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   EL107_RS09755 Genome accession   NZ_LR134314
Coordinates   1474952..1475047 (-) Length   31 a.a.
NCBI ID   WP_198462994.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8302     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1469952..1480047
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL107_RS07505 (NCTC8302_01487) - 1471136..1472911 (-) 1776 WP_011184071.1 acyltransferase family protein -
  EL107_RS07510 (NCTC8302_01488) - 1472908..1473309 (-) 402 WP_002986671.1 MORN repeat-containing protein -
  EL107_RS07515 (NCTC8302_01489) - 1473332..1473769 (-) 438 WP_002994668.1 low molecular weight protein-tyrosine-phosphatase -
  EL107_RS07520 (NCTC8302_01490) ruvB 1473907..1474905 (-) 999 WP_002986679.1 Holliday junction branch migration DNA helicase RuvB -
  EL107_RS09755 (NCTC8302_01491) comS 1474952..1475047 (-) 96 WP_198462994.1 quorum-sensing system DWW-type pheromone Regulator
  EL107_RS07525 (NCTC8302_01492) comR 1475131..1476042 (-) 912 WP_002986681.1 transcriptional regulator Rgg4/ComR Regulator
  EL107_RS07530 (NCTC8302_01493) purB 1476173..1477465 (-) 1293 WP_011184069.1 adenylosuccinate lyase -
  EL107_RS07540 (NCTC8302_01494) - 1477681..1479021 (-) 1341 WP_011184068.1 hypothetical protein -

Sequence

Protein


Download         Length: 31 a.a.        Molecular weight: 3857.66 Da        Isoelectric Point: 10.0436

>NTDB_id=1121169 EL107_RS09755 WP_198462994.1 1474952..1475047(-) (comS) [Streptococcus pyogenes strain NCTC8302]
MLKKYKYYFIFAALLSFKVVQELSAVDWWRL

Nucleotide


Download         Length: 96 bp        

>NTDB_id=1121169 EL107_RS09755 WP_198462994.1 1474952..1475047(-) (comS) [Streptococcus pyogenes strain NCTC8302]
ATGTTAAAAAAGTATAAGTACTATTTTATATTCGCAGCTCTACTATCTTTTAAAGTAGTTCAAGAGCTTAGTGCTGTTGA
CTGGTGGCGATTATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS8232

100

100

1
  comS Streptococcus pyogenes MGAS315

45.161

100

0.452

Multiple sequence alignment