Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   EL115_RS08280 Genome accession   NZ_LR134307
Coordinates   1650270..1651541 (-) Length   423 a.a.
NCBI ID   WP_126441766.1    Uniprot ID   -
Organism   Streptococcus milleri strain NCTC10708     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1645270..1656541
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL115_RS08260 (NCTC10708_01636) - 1645334..1645894 (-) 561 WP_049476080.1 folate family ECF transporter S component -
  EL115_RS08265 (NCTC10708_01638) - 1646074..1647381 (-) 1308 WP_172594031.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -
  EL115_RS08270 (NCTC10708_01639) - 1647447..1648085 (-) 639 WP_115263513.1 CPBP family intramembrane glutamic endopeptidase -
  EL115_RS08275 (NCTC10708_01640) - 1648373..1650232 (-) 1860 WP_039677623.1 proline--tRNA ligase -
  EL115_RS08280 (NCTC10708_01641) eeP 1650270..1651541 (-) 1272 WP_126441766.1 M50 family metallopeptidase Regulator
  EL115_RS08285 (NCTC10708_01642) - 1651694..1652497 (-) 804 WP_048800662.1 phosphatidate cytidylyltransferase -
  EL115_RS08290 (NCTC10708_01643) - 1652506..1653255 (-) 750 WP_039677620.1 isoprenyl transferase -
  EL115_RS08295 (NCTC10708_01644) yajC 1653394..1653729 (-) 336 WP_003070761.1 preprotein translocase subunit YajC -
  EL115_RS08300 (NCTC10708_01645) - 1653833..1654321 (-) 489 WP_003070763.1 prolyl-tRNA synthetase associated domain-containing protein -
  EL115_RS08305 (NCTC10708_01646) tkt 1654414..1656390 (-) 1977 WP_126441767.1 transketolase -

Sequence


Protein


Download         Length: 423 a.a.        Molecular weight: 45814.46 Da        Isoelectric Point: 8.3337

>NTDB_id=1120909 EL115_RS08280 WP_126441766.1 1650270..1651541(-) (eeP) [Streptococcus milleri strain NCTC10708]
MQSGIIGIIAFIIIFGIIVVVHEFGHFYFAKKSGILVREFSIGMGPKIFAHIGKDGTAYTIRMLPLGGYVRMAGWGDDAT
EIKTGTPASLTLNEAGKVIRINLSGKKIDQTALPMNVTGFDLEDKLEITGLVLDEQKTYAVDHDATIVEEDGTEVRIAPL
DVQYQNASLGGRLITNFAGPMNNFILGIVAFLLLIFMQGGVADQHTNHVRVLQGGALAQAGVKNNDQILKVGQAEIKNWS
DLTQAVQSETKNSKGQSELNVTVKSGNKVQELTVKPKKEQGRYLLGVMPGLKSDFPSMIAGGFSMAWNASFRIFDALKNL
IFHPDINKLGGPVAIYKASSEAAKGGIESVIALLAMLSLNIGIFNLIPIPALDGGKIVLNLLEAIRRKPLKQETETYVTL
AGVAVMVLLMIAVTWNDIMRTFF

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=1120909 EL115_RS08280 WP_126441766.1 1650270..1651541(-) (eeP) [Streptococcus milleri strain NCTC10708]
ATGCAGTCAGGTATTATAGGAATTATCGCCTTTATCATTATTTTTGGAATTATTGTTGTCGTTCATGAATTTGGACATTT
CTATTTTGCGAAAAAATCAGGCATTTTGGTACGCGAGTTTTCCATTGGAATGGGTCCAAAAATTTTTGCTCATATTGGCA
AAGATGGAACAGCATATACTATTCGGATGTTACCGCTAGGTGGCTATGTTCGTATGGCAGGCTGGGGTGATGACGCAACA
GAGATTAAGACGGGAACACCTGCTAGTTTGACTTTAAATGAAGCAGGCAAGGTTATCCGAATCAATCTTTCGGGCAAGAA
AATCGACCAGACGGCTTTGCCCATGAATGTGACAGGCTTTGATTTGGAAGATAAGCTTGAAATCACTGGTTTGGTACTAG
ATGAGCAAAAAACGTATGCGGTTGACCATGACGCAACAATCGTAGAAGAAGACGGTACAGAAGTGAGGATTGCACCACTT
GATGTCCAATATCAAAATGCCAGTCTTGGCGGTCGTCTCATTACCAACTTTGCGGGACCAATGAACAACTTCATTTTGGG
AATTGTAGCTTTTTTGCTGTTGATTTTTATGCAGGGGGGCGTTGCAGACCAGCATACAAATCATGTTCGTGTCTTACAGG
GGGGCGCCTTAGCTCAGGCTGGTGTAAAAAACAATGACCAAATTTTAAAAGTTGGTCAAGCAGAAATCAAGAATTGGTCG
GATTTGACCCAAGCTGTTCAGTCTGAGACGAAAAACAGTAAAGGGCAGTCAGAACTAAATGTGACTGTTAAAAGCGGAAA
TAAAGTTCAAGAGCTGACAGTTAAGCCTAAAAAAGAGCAAGGTAGATATTTATTAGGAGTGATGCCGGGCTTGAAATCGG
ATTTTCCGTCTATGATTGCGGGCGGATTTAGCATGGCTTGGAACGCTAGTTTCCGCATCTTTGATGCTTTAAAAAATTTA
ATTTTCCATCCAGACATCAATAAACTGGGCGGTCCTGTGGCGATTTACAAAGCCAGCAGTGAAGCAGCTAAAGGTGGAAT
TGAAAGTGTTATCGCTTTATTAGCTATGCTCTCTCTGAATATCGGCATTTTTAATCTCATTCCTATCCCGGCGCTTGACG
GTGGAAAAATTGTGCTCAATCTGCTTGAAGCCATTCGTCGTAAACCATTAAAGCAGGAAACAGAAACCTATGTCACGTTG
GCAGGTGTCGCTGTTATGGTACTCCTAATGATTGCGGTGACCTGGAATGATATTATGAGAACCTTCTTTTAA

Domains


Predicted by InterproScan.

(10-409)

(210-263)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

66.029

98.818

0.652

  eeP Streptococcus thermophilus LMD-9

65.789

98.818

0.65


Multiple sequence alignment