Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EL116_RS10470 | Genome accession | NZ_LR134304 |
| Coordinates | 2119173..2119568 (-) | Length | 131 a.a. |
| NCBI ID | WP_047531394.1 | Uniprot ID | A0A2K4AER4 |
| Organism | Staphylococcus schweitzeri strain NCTC13712 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2114173..2124568
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL116_RS10445 (NCTC13712_02032) | thiE | 2114774..2115415 (-) | 642 | WP_047531398.1 | thiamine phosphate synthase | - |
| EL116_RS10450 (NCTC13712_02033) | thiM | 2115417..2116208 (-) | 792 | WP_047550971.1 | hydroxyethylthiazole kinase | - |
| EL116_RS10455 (NCTC13712_02034) | thiD | 2116192..2117022 (-) | 831 | WP_047550974.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| EL116_RS10460 (NCTC13712_02035) | tenA | 2117019..2117705 (-) | 687 | WP_047550977.1 | thiaminase II | - |
| EL116_RS10465 (NCTC13712_02037) | sceD | 2118085..2118780 (-) | 696 | WP_047450311.1 | lytic transglycosylase SceD | - |
| EL116_RS10470 (NCTC13712_02038) | ssb | 2119173..2119568 (-) | 396 | WP_047531394.1 | single-stranded DNA-binding protein | Machinery gene |
| EL116_RS10475 (NCTC13712_02039) | - | 2119762..2120202 (+) | 441 | WP_047531393.1 | YwpF-like family protein | - |
| EL116_RS10480 (NCTC13712_02040) | fabZ | 2120260..2120700 (-) | 441 | WP_047531391.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| EL116_RS10485 (NCTC13712_02041) | murA | 2120734..2121999 (-) | 1266 | WP_047427912.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| EL116_RS10490 (NCTC13712_02042) | - | 2122111..2122344 (-) | 234 | WP_000384521.1 | DUF1146 family protein | - |
| EL116_RS10495 (NCTC13712_02043) | - | 2122569..2122973 (-) | 405 | WP_047550980.1 | F0F1 ATP synthase subunit epsilon | - |
| EL116_RS10500 (NCTC13712_02044) | atpD | 2122993..2124405 (-) | 1413 | WP_000511135.1 | F0F1 ATP synthase subunit beta | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15028.15 Da Isoelectric Point: 5.2398
>NTDB_id=1120795 EL116_RS10470 WP_047531394.1 2119173..2119568(-) (ssb) [Staphylococcus schweitzeri strain NCTC13712]
MLNKIVIVGRLTKDVQIFEKEERKVATFCVATQRNYKDENGEIVCDYIFCKAFGKLASNIDKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSLNNEILSDNILDIDSHNLDNPDLLEI
MLNKIVIVGRLTKDVQIFEKEERKVATFCVATQRNYKDENGEIVCDYIFCKAFGKLASNIDKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSLNNEILSDNILDIDSHNLDNPDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=1120795 EL116_RS10470 WP_047531394.1 2119173..2119568(-) (ssb) [Staphylococcus schweitzeri strain NCTC13712]
ATGCTAAACAAAATCGTAATTGTTGGAAGACTAACGAAAGATGTACAAATCTTTGAAAAGGAGGAAAGAAAGGTTGCTAC
GTTTTGCGTTGCAACACAACGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTATATTTTTTGCAAAGCATTTG
GCAAGTTAGCGTCTAACATTGATAAATACACTAATCAAGGTACGCTAGTTGGTATTACAGGTCAAATGAGATCAAGAAAA
TATGATAAAGACGGTCAAACCCACTTTGTTACAGAATTATATGTTGAAACTATAAAGTTCATGTCCCCTAAATCCCTGAA
TAATGAAATTCTCTCAGATAATATTTTAGATATTGACTCTCATAACTTAGATAATCCTGACTTATTAGAAATTTAA
ATGCTAAACAAAATCGTAATTGTTGGAAGACTAACGAAAGATGTACAAATCTTTGAAAAGGAGGAAAGAAAGGTTGCTAC
GTTTTGCGTTGCAACACAACGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTATATTTTTTGCAAAGCATTTG
GCAAGTTAGCGTCTAACATTGATAAATACACTAATCAAGGTACGCTAGTTGGTATTACAGGTCAAATGAGATCAAGAAAA
TATGATAAAGACGGTCAAACCCACTTTGTTACAGAATTATATGTTGAAACTATAAAGTTCATGTCCCCTAAATCCCTGAA
TAATGAAATTCTCTCAGATAATATTTTAGATATTGACTCTCATAACTTAGATAATCCTGACTTATTAGAAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
91.603 |
100 |
0.916 |
| ssb | Staphylococcus aureus MW2 |
90.84 |
100 |
0.908 |