Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | EL084_RS07190 | Genome accession | NZ_LR134292 |
| Coordinates | 1433462..1434418 (+) | Length | 318 a.a. |
| NCBI ID | WP_115254812.1 | Uniprot ID | - |
| Organism | Streptococcus equinus strain NCTC10389 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1428462..1439418
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL084_RS07150 (NCTC10389_01515) | - | 1429357..1429725 (+) | 369 | WP_126439865.1 | DUF1033 family protein | - |
| EL084_RS07155 (NCTC10389_01516) | comYA | 1429794..1430735 (+) | 942 | WP_126439866.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| EL084_RS07160 | comGB | 1430659..1431701 (+) | 1043 | Protein_1373 | competence type IV pilus assembly protein ComGB | - |
| EL084_RS07165 (NCTC10389_01519) | comYC | 1431701..1432003 (+) | 303 | WP_003067906.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| EL084_RS07170 (NCTC10389_01520) | comGD | 1431978..1432418 (+) | 441 | WP_003067905.1 | competence type IV pilus minor pilin ComGD | - |
| EL084_RS07175 (NCTC10389_01521) | comGE | 1432372..1432665 (+) | 294 | WP_003067904.1 | competence type IV pilus minor pilin ComGE | - |
| EL084_RS07180 (NCTC10389_01522) | comYF | 1432649..1433086 (+) | 438 | WP_003067903.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| EL084_RS07185 (NCTC10389_01523) | comGG | 1433097..1433408 (+) | 312 | WP_268921724.1 | competence type IV pilus minor pilin ComGG | - |
| EL084_RS07190 (NCTC10389_01524) | comYH | 1433462..1434418 (+) | 957 | WP_115254812.1 | class I SAM-dependent methyltransferase | Machinery gene |
| EL084_RS07195 (NCTC10389_01525) | - | 1434472..1435671 (+) | 1200 | WP_126439867.1 | acetate kinase | - |
| EL084_RS07200 (NCTC10389_01526) | - | 1435829..1436026 (+) | 198 | WP_126439868.1 | helix-turn-helix transcriptional regulator | - |
| EL084_RS07210 (NCTC10389_01527) | - | 1436545..1437180 (+) | 636 | WP_126439869.1 | CPBP family intramembrane glutamic endopeptidase | - |
| EL084_RS07215 (NCTC10389_01528) | proC | 1437231..1438001 (-) | 771 | WP_126439870.1 | pyrroline-5-carboxylate reductase | - |
| EL084_RS07220 (NCTC10389_01529) | pepA | 1438062..1439129 (-) | 1068 | WP_044023484.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 318 a.a. Molecular weight: 35746.81 Da Isoelectric Point: 4.4305
>NTDB_id=1120457 EL084_RS07190 WP_115254812.1 1433462..1434418(+) (comYH) [Streptococcus equinus strain NCTC10389]
MNFENIETAYGLILENIQLIENELKTHIYDALIEQNSFYLGAEGASEAVAANNEKLRQLNLTKEEWRCTFQFIFIKAAQT
EALQANHQFTPDAIGFILMFLIENLTASKELDVLEIGSGTGNLAQTLLNNSSKDLNYLGIEVDDLLIDLSASIAEVMDSK
AQFVQEDAVRPQILKESDVIISDLPVGFYPNDEIAKRYKVASSEGHTYAHHLLMEQSLKYLKKDGIAVFLAPVSLLTSKQ
SDLLKAWLKDYADVIAVITLPESIFGNAANAKSIFVLKKQAEHTPETFVYPLADLQSREVLTDFIDKFKKWNIENMIF
MNFENIETAYGLILENIQLIENELKTHIYDALIEQNSFYLGAEGASEAVAANNEKLRQLNLTKEEWRCTFQFIFIKAAQT
EALQANHQFTPDAIGFILMFLIENLTASKELDVLEIGSGTGNLAQTLLNNSSKDLNYLGIEVDDLLIDLSASIAEVMDSK
AQFVQEDAVRPQILKESDVIISDLPVGFYPNDEIAKRYKVASSEGHTYAHHLLMEQSLKYLKKDGIAVFLAPVSLLTSKQ
SDLLKAWLKDYADVIAVITLPESIFGNAANAKSIFVLKKQAEHTPETFVYPLADLQSREVLTDFIDKFKKWNIENMIF
Nucleotide
Download Length: 957 bp
>NTDB_id=1120457 EL084_RS07190 WP_115254812.1 1433462..1434418(+) (comYH) [Streptococcus equinus strain NCTC10389]
ATGAATTTTGAAAATATCGAAACAGCCTATGGGTTGATTCTTGAAAATATACAATTAATCGAAAATGAGTTGAAAACACA
CATTTACGATGCACTTATTGAACAAAACTCTTTTTATCTTGGTGCTGAGGGTGCCAGTGAAGCTGTAGCTGCAAATAATG
AGAAACTACGCCAACTTAACTTAACTAAGGAAGAATGGCGCTGTACTTTTCAGTTTATCTTTATTAAAGCTGCGCAAACA
GAAGCTCTTCAGGCAAATCACCAATTTACACCTGATGCTATTGGCTTCATTTTAATGTTCCTCATTGAGAATTTGACAGC
TTCTAAGGAACTTGATGTTTTGGAAATTGGTAGCGGAACAGGTAACCTTGCCCAAACGTTGTTGAACAACTCATCTAAAG
ATCTAAACTATCTAGGTATTGAAGTTGATGATTTGTTGATTGACTTGTCAGCAAGTATCGCTGAAGTTATGGATTCTAAA
GCTCAATTCGTTCAAGAAGATGCTGTACGCCCACAGATTCTTAAGGAAAGTGATGTCATCATCAGTGACCTTCCAGTCGG
ATTCTATCCAAATGATGAAATTGCAAAACGTTACAAAGTAGCCAGTAGTGAAGGGCACACTTATGCGCATCATTTGTTGA
TGGAACAATCTCTTAAATATCTCAAAAAAGACGGGATTGCTGTCTTTTTAGCACCAGTTAGTCTTTTGACAAGTAAGCAA
AGTGACCTGTTGAAAGCATGGTTGAAGGATTATGCTGATGTGATTGCTGTGATTACTTTGCCAGAATCTATCTTTGGAAA
TGCAGCCAATGCGAAATCAATTTTCGTTTTGAAAAAACAAGCTGAACATACTCCAGAAACCTTTGTTTATCCACTTGCTG
ACTTGCAAAGTCGAGAAGTGTTGACAGACTTCATTGATAAATTTAAAAAATGGAATATTGAAAATATGATTTTTTAA
ATGAATTTTGAAAATATCGAAACAGCCTATGGGTTGATTCTTGAAAATATACAATTAATCGAAAATGAGTTGAAAACACA
CATTTACGATGCACTTATTGAACAAAACTCTTTTTATCTTGGTGCTGAGGGTGCCAGTGAAGCTGTAGCTGCAAATAATG
AGAAACTACGCCAACTTAACTTAACTAAGGAAGAATGGCGCTGTACTTTTCAGTTTATCTTTATTAAAGCTGCGCAAACA
GAAGCTCTTCAGGCAAATCACCAATTTACACCTGATGCTATTGGCTTCATTTTAATGTTCCTCATTGAGAATTTGACAGC
TTCTAAGGAACTTGATGTTTTGGAAATTGGTAGCGGAACAGGTAACCTTGCCCAAACGTTGTTGAACAACTCATCTAAAG
ATCTAAACTATCTAGGTATTGAAGTTGATGATTTGTTGATTGACTTGTCAGCAAGTATCGCTGAAGTTATGGATTCTAAA
GCTCAATTCGTTCAAGAAGATGCTGTACGCCCACAGATTCTTAAGGAAAGTGATGTCATCATCAGTGACCTTCCAGTCGG
ATTCTATCCAAATGATGAAATTGCAAAACGTTACAAAGTAGCCAGTAGTGAAGGGCACACTTATGCGCATCATTTGTTGA
TGGAACAATCTCTTAAATATCTCAAAAAAGACGGGATTGCTGTCTTTTTAGCACCAGTTAGTCTTTTGACAAGTAAGCAA
AGTGACCTGTTGAAAGCATGGTTGAAGGATTATGCTGATGTGATTGCTGTGATTACTTTGCCAGAATCTATCTTTGGAAA
TGCAGCCAATGCGAAATCAATTTTCGTTTTGAAAAAACAAGCTGAACATACTCCAGAAACCTTTGTTTATCCACTTGCTG
ACTTGCAAAGTCGAGAAGTGTTGACAGACTTCATTGATAAATTTAAAAAATGGAATATTGAAAATATGATTTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
68.671 |
99.371 |
0.682 |
| comYH | Streptococcus mutans UA159 |
68.354 |
99.371 |
0.679 |