Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   EL092_RS03940 Genome accession   NZ_LR134291
Coordinates   820703..821506 (+) Length   267 a.a.
NCBI ID   WP_008809002.1    Uniprot ID   A8AWC0
Organism   Streptococcus gordonii strain NCTC7868     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 815703..826506
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL092_RS10830 (NCTC7868_00777) - 816043..816414 (+) 372 WP_012000239.1 hypothetical protein -
  EL092_RS03925 (NCTC7868_00778) thrS 816506..818449 (+) 1944 WP_012000240.1 threonine--tRNA ligase -
  EL092_RS03930 (NCTC7868_00779) micA 818655..819356 (+) 702 WP_012000241.1 response regulator YycF Regulator
  EL092_RS03935 (NCTC7868_00780) micB 819349..820710 (+) 1362 WP_008809003.1 cell wall metabolism sensor histidine kinase VicK Regulator
  EL092_RS03940 (NCTC7868_00781) vicX 820703..821506 (+) 804 WP_008809002.1 MBL fold metallo-hydrolase Regulator
  EL092_RS03945 (NCTC7868_00782) - 821541..821897 (+) 357 WP_008809001.1 YbaN family protein -
  EL092_RS03950 (NCTC7868_00783) rnc 822140..822838 (+) 699 WP_012000242.1 ribonuclease III -
  EL092_RS03955 (NCTC7868_00784) smc 822829..826362 (+) 3534 WP_012000243.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29688.63 Da        Isoelectric Point: 5.9427

>NTDB_id=1120358 EL092_RS03940 WP_008809002.1 820703..821506(+) (vicX) [Streptococcus gordonii strain NCTC7868]
MTKEGFKYSILASGSSGNCFYLETAQKKILVDAGLSGKKITSLLSEINRKPEDLDAILVTHEHKDHIHGVGVLARKYNLD
IYANEDTWKAMDSALGKIDISQKHIFEMGKVMTFGDIDIESFGVSHDAAAPQFYRFMKDDKSFVMLTDTGYVSDRMAGVV
ENADGYLIESNHDVEILRSGAYPWSLKQRILSDKGHLSNEDGADTMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVNQL
AQADLAVNHDFQVLDTSPDTATPLTSI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=1120358 EL092_RS03940 WP_008809002.1 820703..821506(+) (vicX) [Streptococcus gordonii strain NCTC7868]
ATGACTAAGGAAGGTTTTAAGTATAGCATTTTAGCATCTGGATCTAGTGGTAATTGTTTTTATTTAGAAACAGCCCAAAA
GAAGATTTTAGTGGATGCGGGACTATCTGGTAAAAAAATCACTAGTCTCCTAAGTGAAATTAATCGTAAACCAGAAGATT
TAGATGCTATTTTAGTAACTCATGAACATAAGGATCACATTCATGGTGTTGGGGTCTTAGCCCGCAAGTATAATTTAGAT
ATCTATGCTAATGAAGATACTTGGAAAGCTATGGATAGTGCCTTAGGGAAAATTGATATCAGCCAAAAGCATATTTTTGA
AATGGGTAAGGTTATGACTTTTGGTGATATAGATATTGAAAGTTTTGGTGTTAGCCATGATGCGGCGGCACCACAATTTT
ATCGGTTTATGAAAGACGATAAAAGCTTTGTCATGCTGACGGATACGGGCTATGTGAGTGACCGTATGGCTGGAGTAGTT
GAAAATGCTGATGGTTACTTGATTGAGAGTAATCATGATGTAGAAATTTTGCGTAGTGGAGCTTACCCTTGGAGTCTTAA
GCAACGTATTTTATCCGATAAAGGCCACTTATCTAATGAAGATGGTGCTGATACGATGATTCGAACCTTGGGGAACCGTA
CCAAAAAGATTTATCTAGGTCACTTGAGTAAGGAGAATAATATCAAGGAGCTTGCTCATATGACTATGGTTAATCAGCTG
GCTCAAGCTGACTTGGCAGTCAATCATGACTTTCAAGTTTTGGATACTTCGCCAGATACAGCTACGCCTCTGACATCAAT
TTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-213)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A8AWC0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

80.524

100

0.805

Multiple sequence alignment