Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   EL111_RS00290 Genome accession   NZ_LR134287
Coordinates   64801..65268 (+) Length   155 a.a.
NCBI ID   WP_123795733.1    Uniprot ID   A0A5P3MQK6
Organism   Neisseria animalis strain NCTC10212     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 59801..70268
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL111_RS00280 (NCTC10212_00056) - 59942..64168 (+) 4227 WP_123795735.1 translocation/assembly module TamB domain-containing protein -
  EL111_RS00285 - 64285..64674 (-) 390 WP_123795734.1 hypothetical protein -
  EL111_RS00290 (NCTC10212_00057) recX 64801..65268 (+) 468 WP_123795733.1 recombination regulator RecX Regulator
  EL111_RS00295 (NCTC10212_00058) rsgA 65834..66700 (-) 867 WP_123795732.1 ribosome small subunit-dependent GTPase A -
  EL111_RS00300 (NCTC10212_00059) - 66793..67503 (-) 711 WP_123795731.1 YggS family pyridoxal phosphate-dependent enzyme -
  EL111_RS00305 (NCTC10212_00060) pilT 67590..68633 (+) 1044 WP_123795730.1 type IV pilus twitching motility protein PilT Machinery gene
  EL111_RS00310 (NCTC10212_00061) - 68730..69959 (+) 1230 WP_123795729.1 PilT/PilU family type 4a pilus ATPase -

Sequence

Protein


Download         Length: 155 a.a.        Molecular weight: 18207.46 Da        Isoelectric Point: 9.2361

>NTDB_id=1120191 EL111_RS00290 WP_123795733.1 64801..65268(+) (recX) [Neisseria animalis strain NCTC10212]
MKPQKSLRARAMDILSRQEVSRAGLRRKLAPHAESTEELEQVLAEFSERNWQSDERYAEAYIHSKSRLHGTLRLKQALSA
QGIDEEISTRFLPDRDSERQTAAAVLRKKFKQPAADLKEKQKQVRFLAYRGFDMDTIQTALRYAWDEEYWQDGYE

Nucleotide


Download         Length: 468 bp        

>NTDB_id=1120191 EL111_RS00290 WP_123795733.1 64801..65268(+) (recX) [Neisseria animalis strain NCTC10212]
ATGAAACCACAAAAATCCCTACGCGCCCGCGCGATGGACATTTTATCGCGCCAAGAAGTCAGCCGTGCCGGATTACGGCG
CAAACTCGCTCCCCACGCGGAAAGCACGGAAGAGCTGGAGCAGGTGCTGGCCGAATTCAGCGAGCGCAACTGGCAATCGG
ACGAACGCTACGCCGAAGCCTATATCCACAGCAAAAGCCGTCTGCACGGCACTTTGCGCCTGAAACAAGCCTTATCCGCG
CAAGGCATAGACGAGGAAATCAGCACACGTTTCCTGCCCGACCGAGACAGCGAACGCCAAACGGCAGCGGCGGTATTGCG
GAAAAAGTTCAAACAGCCGGCCGCAGATTTGAAAGAAAAGCAGAAACAAGTACGCTTTCTGGCTTACCGCGGCTTCGATA
TGGATACCATTCAAACCGCATTACGCTACGCATGGGACGAAGAATACTGGCAGGACGGATACGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-142)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5P3MQK6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

79.085

98.71

0.781

Multiple sequence alignment