Detailed information NTG1120187

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: EL100_RS07955
• Genome accession: NZ_LR134285
• Coordinates: 1662842..1664074 (+)
• Length: 410 a.a.
• NCBI ID: WP_023023314.1
• Uniprot ID: A0A7X3AWQ0
• Organism: Streptococcus australis strain NCTC3168
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1657842..1669074

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL100_RS07950 (NCTC3168_01631)	-	1662119..1662631 (+)	513	WP_023023315.1	dihydrofolate reductase	-
EL100_RS07955 (NCTC3168_01633)	clpX	1662842..1664074 (+)	1233	WP_023023314.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
EL100_RS07960 (NCTC3168_01634)	yihA	1664086..1664682 (+)	597	WP_023023313.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
EL100_RS07965 (NCTC3168_01635)	-	1664829..1665527 (+)	699	WP_126404286.1	glucosaminidase domain-containing protein	-
EL100_RS07970 (NCTC3168_01636)	-	1665719..1666516 (+)	798	WP_126404285.1	formate/nitrite transporter family protein	-
EL100_RS07975 (NCTC3168_01638)	rplJ	1666752..1667252 (+)	501	WP_126404284.1	50S ribosomal protein L10	-
EL100_RS07980 (NCTC3168_01639)	rplL	1667329..1667697 (+)	369	WP_061564003.1	50S ribosomal protein L7/L12	-
EL100_RS07985	-	1667727..1667978 (+)	252	WP_126404283.1	hypothetical protein	-
EL100_RS09860 (NCTC3168_01641)	-	1668038..1668160 (+)	123	WP_126404282.1	hypothetical protein	-

Sequence

Protein

• Length: 410 a.a.
• Molecular weight: 45540.99 Da
• Isoelectric Point: 4.3434

>NTDB_id=1120187 EL100_RS07955 WP_023023314.1 1662842..1664074(+) (clpX) [Streptococcus australis strain NCTC3168]
MPTNQSNDMMVYCSFCGKNQDEVQKIIAGNNAFICNECVELAQEIIREELAEEVLADLSEVPKPIELLNILNHYVIGQDR
AKRALAVAVYNHYKRINFHENREDDNDVDLQKSNILMVGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVEN
ILLKLLQAADFNIERAERGIIYVDEIDKIAKKSENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT
KNILFIVGGAFDGIEEIVKQRLGEKIIGFGQNNKAIDESSSYMQEIIAEDIQKFGIIPELIGRLPVLAALEQLTVDDLVR
ILKEPRNALVKQYQALLSFDDVELEFDDEALEEIASKAIERKTGARGLRSIIEETMLDVMFEVPSQEDVKMVRITKEAVN
GTEKPILETA

Nucleotide

• Length: 1233 bp

>NTDB_id=1120187 EL100_RS07955 WP_023023314.1 1662842..1664074(+) (clpX) [Streptococcus australis strain NCTC3168]
ATGCCTACAAATCAATCAAACGATATGATGGTTTATTGTTCGTTTTGTGGTAAGAACCAAGACGAAGTACAGAAGATTAT
TGCTGGGAACAATGCCTTTATCTGTAATGAATGTGTTGAGTTAGCTCAAGAAATCATTCGAGAAGAATTAGCTGAGGAAG
TCTTGGCAGACCTTTCAGAGGTTCCAAAACCAATCGAACTTCTCAATATCCTTAACCACTATGTCATCGGTCAAGATCGT
GCTAAACGAGCACTAGCAGTAGCTGTCTACAATCACTACAAACGGATTAACTTCCACGAAAATCGTGAAGATGACAACGA
TGTGGATCTACAAAAATCAAACATTTTGATGGTCGGTCCTACAGGTTCAGGAAAAACTTTCTTAGCTCAAACGCTTGCTA
AGAGTTTAAATGTGCCATTTGCCATCGCCGATGCAACAGCCTTGACAGAAGCGGGTTACGTCGGAGAAGACGTTGAGAAC
ATCCTTCTTAAGCTCTTGCAAGCAGCTGATTTCAATATCGAACGTGCTGAGCGAGGCATCATCTATGTTGATGAAATCGA
TAAGATTGCCAAGAAGAGTGAGAACGTCTCGATTACTCGTGATGTATCTGGTGAAGGGGTACAGCAAGCCCTCTTGAAGA
TCATCGAGGGTACTGTAGCGAGTGTTCCACCTCAAGGCGGACGCAAGCATCCTCAACAAGAGATGATCCAAGTTGACACC
AAAAACATTCTTTTCATCGTTGGTGGAGCCTTTGATGGAATTGAAGAAATTGTGAAACAACGTCTAGGTGAAAAGATTAT
TGGGTTTGGTCAAAACAACAAAGCCATTGATGAATCCAGCTCTTACATGCAAGAAATCATTGCAGAAGATATCCAAAAAT
TCGGTATTATTCCTGAGTTAATCGGTCGTCTTCCAGTTCTTGCTGCATTAGAGCAATTGACAGTGGATGACTTGGTTCGT
ATTTTGAAAGAACCAAGAAATGCCTTGGTGAAACAATATCAGGCTCTCTTATCCTTCGATGATGTTGAATTAGAATTTGA
TGACGAAGCGCTAGAAGAAATTGCAAGTAAAGCCATTGAACGCAAGACTGGTGCTCGCGGACTACGCTCCATCATCGAAG
AAACTATGTTGGATGTGATGTTTGAAGTTCCAAGTCAAGAAGACGTCAAAATGGTTCGGATCACCAAAGAAGCAGTTAAC
GGAACTGAAAAACCAATTTTAGAAACTGCCTAG

Domains

Predicted by InterproScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (313-390)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (111-306)

3D structure

• AlphaFold DB: A0A7X3AWQ0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	87.561	100	0.876
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.209	98.049	0.571