Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   EL070_RS10455 Genome accession   NZ_LR134284
Coordinates   55272..55367 (+) Length   31 a.a.
NCBI ID   WP_198462994.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8232     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 50272..60367
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL070_RS00325 (NCTC8232_00064) purK 50336..51409 (+) 1074 WP_164552673.1 5-(carboxyamino)imidazole ribonucleotide synthase -
  EL070_RS00330 (NCTC8232_00065) - 51411..52829 (+) 1419 WP_011888524.1 hypothetical protein -
  EL070_RS00335 (NCTC8232_00066) purB 52849..54141 (+) 1293 WP_111705416.1 adenylosuccinate lyase -
  EL070_RS00340 (NCTC8232_00067) comR 54276..55187 (+) 912 WP_002986681.1 transcriptional regulator Rgg4/ComR Regulator
  EL070_RS10455 (NCTC8232_00068) comS 55272..55367 (+) 96 WP_198462994.1 quorum-sensing system DWW-type pheromone Regulator
  EL070_RS00345 (NCTC8232_00069) ruvB 55414..56412 (+) 999 WP_002986679.1 Holliday junction branch migration DNA helicase RuvB -
  EL070_RS00350 (NCTC8232_00070) - 56550..56987 (+) 438 WP_002994668.1 low molecular weight protein-tyrosine-phosphatase -
  EL070_RS00355 (NCTC8232_00071) - 57010..57411 (+) 402 WP_011017240.1 MORN repeat-containing protein -
  EL070_RS00360 (NCTC8232_00072) - 57408..59183 (+) 1776 WP_111705417.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 31 a.a.        Molecular weight: 3857.66 Da        Isoelectric Point: 10.0436

>NTDB_id=1120132 EL070_RS10455 WP_198462994.1 55272..55367(+) (comS) [Streptococcus pyogenes strain NCTC8232]
MLKKYKYYFIFAALLSFKVVQELSAVDWWRL

Nucleotide


Download         Length: 96 bp        

>NTDB_id=1120132 EL070_RS10455 WP_198462994.1 55272..55367(+) (comS) [Streptococcus pyogenes strain NCTC8232]
ATGTTAAAAAAGTATAAGTACTATTTTATATTCGCAGCTCTACTATCTTTTAAAGTAGTTCAAGAGCTTAGTGCTGTTGA
CTGGTGGCGATTATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS8232

100

100

1
  comS Streptococcus pyogenes MGAS315

45.161

100

0.452

Multiple sequence alignment