Detailed information    

insolico Bioinformatically predicted

Overview

Name   lqsT   Type   Regulator
Locus tag   LOA_RS15320 Genome accession   NZ_CP004006
Coordinates   1591085..1591387 (-) Length   100 a.a.
NCBI ID   WP_238551189.1    Uniprot ID   W0B9U3
Organism   Legionella oakridgensis ATCC 33761 = DSM 21215     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1586085..1596387
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LOA_RS07755 (Loa_01736) gatA 1586106..1587560 (+) 1455 WP_025385836.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA -
  LOA_RS07760 (Loa_01737) gatB 1587557..1588990 (+) 1434 WP_025385837.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB -
  LOA_RS07765 (Loa_01738) - 1589046..1589606 (-) 561 WP_025385838.1 L,D-transpeptidase -
  LOA_RS07770 (Loa_01739) - 1589682..1590089 (-) 408 WP_042238836.1 c-type cytochrome -
  LOA_RS07775 (Loa_01740) - 1590430..1591041 (+) 612 WP_025385840.1 iron-containing redox enzyme family protein -
  LOA_RS15320 (Loa_01741) lqsT 1591085..1591387 (-) 303 WP_238551189.1 ATP-binding protein Regulator
  LOA_RS07785 (Loa_01742) lqsT 1591381..1592373 (-) 993 WP_042238845.1 HAMP domain-containing histidine kinase Regulator
  LOA_RS07790 (Loa_01743) - 1592379..1593275 (-) 897 WP_025385841.1 DMT family transporter -
  LOA_RS07795 (Loa_01745) - 1593632..1594207 (-) 576 WP_025385842.1 TIGR00645 family protein -
  LOA_RS07800 (Loa_01746) - 1594340..1594630 (-) 291 WP_025384802.1 GIY-YIG nuclease family protein -
  LOA_RS07805 (Loa_01747) - 1594667..1595353 (-) 687 WP_025385843.1 IS66 family transposase -

Sequence

Protein


Download         Length: 100 a.a.        Molecular weight: 11334.05 Da        Isoelectric Point: 7.7058

>NTDB_id=112011 LOA_RS15320 WP_238551189.1 1591085..1591387(-) (lqsT) [Legionella oakridgensis ATCC 33761 = DSM 21215]
MLKNSLDCIEETGKGDISIWLTRGNEEDNFNYLNIMDTAKGIYPKQAEKIFESFYSDRKGGTGVGLAYCKMLMKTAGGDI
YCKGKFNQFAHFILKFPKID

Nucleotide


Download         Length: 303 bp        

>NTDB_id=112011 LOA_RS15320 WP_238551189.1 1591085..1591387(-) (lqsT) [Legionella oakridgensis ATCC 33761 = DSM 21215]
TTGTTAAAAAACAGCTTGGATTGCATCGAGGAAACAGGGAAAGGTGATATTTCTATTTGGTTAACTCGAGGAAATGAAGA
GGATAATTTTAATTACCTGAATATCATGGATACGGCCAAAGGCATTTATCCAAAGCAAGCTGAGAAGATTTTTGAGTCAT
TTTACTCTGATCGTAAGGGAGGAACAGGAGTAGGGCTGGCTTATTGCAAGATGTTGATGAAAACAGCTGGTGGTGATATT
TATTGTAAGGGAAAATTTAATCAATTTGCTCATTTTATTCTTAAATTTCCAAAAATAGATTGA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(2-97)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB W0B9U3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  lqsT Legionella pneumophila subsp. pneumophila str. Philadelphia 1

71

100

0.71

Multiple sequence alignment