Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   EL079_RS04125 Genome accession   NZ_LR134283
Coordinates   836919..837722 (-) Length   267 a.a.
NCBI ID   WP_003032665.1    Uniprot ID   -
Organism   Streptococcus anginosus strain NCTC10713     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 831919..842722
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL079_RS04110 (NCTC10713_00866) smc 831938..835471 (-) 3534 WP_003032703.1 chromosome segregation protein SMC -
  EL079_RS04115 (NCTC10713_00867) rnc 835462..836160 (-) 699 WP_003032757.1 ribonuclease III -
  EL079_RS04120 - 836553..836910 (-) 358 Protein_806 YbaN family protein -
  EL079_RS04125 (NCTC10713_00868) vicX 836919..837722 (-) 804 WP_003032665.1 MBL fold metallo-hydrolase Regulator
  EL079_RS04130 (NCTC10713_00869) micB 837724..839076 (-) 1353 WP_003032751.1 cell wall metabolism sensor histidine kinase VicK Regulator
  EL079_RS04135 (NCTC10713_00870) micA 839069..839770 (-) 702 WP_003025150.1 response regulator YycF Regulator
  EL079_RS04140 (NCTC10713_00871) - 840064..840405 (-) 342 WP_003032667.1 hypothetical protein -
  EL079_RS04145 (NCTC10713_00872) - 840432..841745 (-) 1314 WP_003032712.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29896.86 Da        Isoelectric Point: 6.0342

>NTDB_id=1120017 EL079_RS04125 WP_003032665.1 836919..837722(-) (vicX) [Streptococcus anginosus strain NCTC10713]
MSEKGFKYSILASGSTGNCFYLETPKKRLLIDAGLSGKKITSLLSEIDRKPEDLDAILVTHEHKDHIHGVGVLARKYHLD
IYANQETWNAMEVALGKIDVSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRLMKDDKSFVLLTDTGYVSDRMAGII
ENADGYLIESNHDIEILRSGAYPWSLKQRILSDQGHLSNDDGAETMIRTLGYRTKKIYLGHLSKENNTKELAHITMINQL
AQADLAVEHDFHICDTSPDTATPLTNI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=1120017 EL079_RS04125 WP_003032665.1 836919..837722(-) (vicX) [Streptococcus anginosus strain NCTC10713]
ATGAGCGAGAAAGGATTTAAGTATAGTATTTTGGCATCGGGTTCTACCGGTAACTGTTTTTATTTAGAAACTCCAAAGAA
GAGGTTGTTGATTGATGCGGGCTTGTCTGGGAAGAAAATTACCAGCTTATTGAGTGAGATTGACCGCAAGCCAGAGGATT
TGGATGCTATTTTGGTGACGCACGAGCATAAGGATCATATCCACGGTGTGGGCGTTTTGGCACGGAAATATCATTTAGAC
ATCTATGCGAACCAAGAAACATGGAATGCTATGGAAGTAGCGCTTGGGAAGATTGATGTCAGTCAGAAGCATATTTTTGA
AATGGGAAAAACCAAGACATTTGGCGATATTGACATTGAAAGTTTTGGTGTTAGTCATGATGCGGTTGCGCCGCAATTTT
ACCGATTGATGAAGGATGATAAGAGTTTTGTTCTACTGACGGATACTGGCTATGTTAGCGATCGTATGGCAGGGATTATT
GAAAATGCGGACGGGTATTTGATTGAGTCTAACCATGATATTGAAATCCTTCGTAGCGGAGCTTATCCTTGGAGTCTGAA
GCAACGGATTTTATCTGACCAAGGACATTTGTCGAATGATGACGGGGCAGAAACCATGATTCGTACGTTGGGTTATCGCA
CTAAGAAAATCTATCTAGGTCATCTTAGCAAAGAAAACAATACCAAAGAATTGGCTCATATCACAATGATCAATCAATTA
GCACAGGCTGATTTGGCGGTTGAGCATGATTTTCATATTTGTGATACATCGCCGGATACGGCGACACCTTTAACAAATAT
TTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

82.022

100

0.82

Multiple sequence alignment