Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   EL078_RS01400 Genome accession   NZ_LR134282
Coordinates   247597..248859 (+) Length   420 a.a.
NCBI ID   WP_126437586.1    Uniprot ID   -
Organism   Streptococcus equinus strain NCTC8140     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 242597..253859
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL078_RS01375 (NCTC8140_00273) galE 243441..244439 (+) 999 WP_027968094.1 UDP-glucose 4-epimerase GalE -
  EL078_RS01380 (NCTC8140_00274) - 244519..245370 (+) 852 WP_126437585.1 GNAT family N-acetyltransferase -
  EL078_RS01385 (NCTC8140_00275) yajC 245471..245815 (+) 345 WP_024344794.1 preprotein translocase subunit YajC -
  EL078_RS01390 (NCTC8140_00276) - 245950..246705 (+) 756 WP_024344795.1 isoprenyl transferase -
  EL078_RS01395 (NCTC8140_00277) - 246718..247512 (+) 795 WP_021141602.1 phosphatidate cytidylyltransferase -
  EL078_RS01400 (NCTC8140_00278) eeP 247597..248859 (+) 1263 WP_126437586.1 RIP metalloprotease RseP Regulator
  EL078_RS01405 (NCTC8140_00279) - 249012..250868 (+) 1857 WP_126437587.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 420 a.a.        Molecular weight: 45484.12 Da        Isoelectric Point: 8.3085

>NTDB_id=1119956 EL078_RS01400 WP_126437586.1 247597..248859(+) (eeP) [Streptococcus equinus strain NCTC8140]
MLGILTFIIVFGILVIVHEFGHLYFAKKAGILVREFSIGMGPKIFSHFDKEGTAYTFRILPLGGYVRMAGWGDDTTEIKT
GTPASLTMNEDGLVTRINLSNKHLDNTALPMNVTSYDLEDKLEITGLVLDEQKTFAVHHDATIVEEDGTEIRIAPLDVQY
QNATVLGRLMTNFAGPMNNFILGILAFILLVFMQGGVPNTATNAVRVADGGAMQAAGVKNGDRVLAIGDYKVTNWSDLTE
AVTKSTKNISKGDTITVKVKDKSGKVKTLAVKPVENHGSYLIGVSSALKTGFWDKITGGFQMAWQGATAILNALKGLVSN
FSLNKLGGPVAMYQASSQAASYGLTSVVNLLALLSINLGIVNLIPIPALDGGKILMNLIEIVRRKPLKQETETYITLVGV
VIMIILMIAVTWNDIMRVFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=1119956 EL078_RS01400 WP_126437586.1 247597..248859(+) (eeP) [Streptococcus equinus strain NCTC8140]
ATGCTCGGAATATTAACGTTTATTATTGTTTTTGGAATTTTAGTTATTGTCCATGAATTTGGTCACCTGTATTTTGCCAA
AAAAGCAGGAATCTTGGTGAGAGAATTTTCTATCGGCATGGGCCCGAAAATCTTTTCTCATTTTGATAAAGAAGGTACAG
CCTATACATTTCGTATCTTGCCACTTGGTGGCTATGTTCGTATGGCTGGCTGGGGTGATGACACTACTGAAATTAAAACT
GGTACACCTGCTAGCCTTACGATGAATGAAGATGGCTTAGTAACACGAATTAATTTATCAAACAAGCACTTGGATAACAC
AGCACTTCCGATGAACGTGACGTCTTATGATTTGGAAGATAAATTAGAAATTACTGGTCTTGTCTTAGATGAACAAAAGA
CTTTTGCTGTTCACCATGATGCAACCATCGTTGAAGAAGATGGTACAGAAATTCGCATTGCTCCGCTTGACGTGCAGTAC
CAAAATGCGACGGTTCTTGGCCGCTTGATGACAAACTTTGCTGGTCCGATGAATAACTTTATTCTTGGAATCTTGGCATT
TATCCTTCTTGTTTTCATGCAAGGTGGTGTGCCAAACACTGCAACTAATGCCGTTCGAGTGGCTGATGGTGGTGCCATGC
AAGCAGCAGGCGTCAAAAATGGTGATAGAGTTTTAGCTATCGGTGATTATAAAGTCACAAACTGGTCTGATTTGACTGAA
GCTGTAACTAAGTCGACTAAGAATATCTCAAAAGGCGACACTATCACAGTCAAAGTCAAAGATAAATCAGGAAAGGTTAA
AACACTTGCTGTTAAACCAGTTGAAAATCACGGAAGTTACCTTATTGGTGTTTCTTCAGCTTTGAAAACAGGCTTCTGGG
ATAAAATCACTGGCGGTTTCCAAATGGCATGGCAAGGTGCTACAGCCATTCTCAATGCACTAAAAGGTCTTGTGTCAAAC
TTTAGTTTGAACAAGCTAGGTGGTCCAGTTGCCATGTACCAAGCTTCAAGCCAAGCAGCATCTTATGGATTGACTTCTGT
TGTTAATCTTTTAGCGCTGTTATCAATCAACCTTGGAATTGTTAATTTAATTCCGATTCCAGCTTTGGACGGTGGAAAAA
TCTTAATGAATTTGATTGAGATTGTTCGCCGCAAACCATTGAAACAAGAAACTGAAACCTATATCACTCTGGTCGGTGTC
GTCATTATGATTATTTTAATGATTGCTGTGACATGGAATGATATCATGCGCGTCTTTTTCTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(205-272)

Peptidase family M50 (Peptidase_M50)

(6-406)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

67.857

100

0.679
  eeP Streptococcus thermophilus LMG 18311

67.619

100

0.676

Multiple sequence alignment