Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   EL076_RS08125 Genome accession   NZ_LR134275
Coordinates   1611579..1612655 (-) Length   358 a.a.
NCBI ID   WP_197716138.1    Uniprot ID   A0A448ACF9
Organism   Streptococcus vestibularis strain NCTC12167     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1606579..1617655
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL076_RS10360 (NCTC12167_01593) - 1607320..1607481 (+) 162 WP_082162585.1 MFS transporter -
  EL076_RS10365 - 1607501..1607641 (+) 141 WP_164555383.1 hypothetical protein -
  EL076_RS08105 (NCTC12167_01594) - 1607690..1609756 (-) 2067 WP_126429976.1 sodium:proton antiporter -
  EL076_RS08110 (NCTC12167_01595) - 1609765..1610007 (-) 243 WP_003094091.1 hypothetical protein -
  EL076_RS08115 (NCTC12167_01596) - 1610004..1610552 (-) 549 WP_048788174.1 class I SAM-dependent methyltransferase -
  EL076_RS08120 (NCTC12167_01597) - 1610549..1611493 (-) 945 WP_003094636.1 TIGR01212 family radical SAM protein -
  EL076_RS08125 (NCTC12167_01598) sepM 1611579..1612655 (-) 1077 WP_197716138.1 SepM family pheromone-processing serine protease Regulator
  EL076_RS08130 (NCTC12167_01599) coaD 1612633..1613130 (-) 498 WP_126429978.1 pantetheine-phosphate adenylyltransferase -
  EL076_RS08135 (NCTC12167_01600) rsmD 1613163..1613702 (-) 540 WP_003093460.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  EL076_RS08140 (NCTC12167_01601) - 1613885..1615159 (-) 1275 WP_126429980.1 2-hydroxycarboxylate transporter family protein -
  EL076_RS08145 (NCTC12167_01602) - 1615181..1616803 (-) 1623 WP_003096209.1 malolactic enzyme -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 39291.23 Da        Isoelectric Point: 9.6574

>NTDB_id=1119907 EL076_RS08125 WP_197716138.1 1611579..1612655(-) (sepM) [Streptococcus vestibularis strain NCTC12167]
MANKTKSKLLLEKMWRIKWWLLSIFTVLFLLFALFFPLNNYYVELPGGAFDTKEVLTVDKKADDSKGSYNFVAVAQTKAT
LALMLYAQLNDFAKLQTAKEATGNYSDEDFMRINQFYMETSQNQAIYQGLTLAGKEASLEYMGVYVLQVADDSSFKSVLN
IADTVTAVNGKTFDNSTDLIKYVQGLKLGSKVKVTYTTDDKEKTATGKIIKIANGKNGIGIGLTDHTEVKSPENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKDGSVGDIGGAYLKVKSAADSGADIFFVPNNPVTKEMKKVDPD
AKTNYQEAKEAAKKLRTKMKIVPIKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=1119907 EL076_RS08125 WP_197716138.1 1611579..1612655(-) (sepM) [Streptococcus vestibularis strain NCTC12167]
GTGGCAAACAAGACAAAATCTAAATTACTATTAGAGAAAATGTGGCGTATTAAGTGGTGGTTATTAAGTATTTTTACGGT
ACTTTTCCTCCTTTTTGCCCTCTTTTTCCCGCTAAATAATTATTATGTTGAGCTTCCGGGTGGTGCTTTTGATACCAAGG
AAGTCTTGACTGTAGATAAGAAAGCTGATGATTCAAAAGGATCCTACAATTTTGTGGCGGTGGCCCAAACCAAGGCGACT
TTGGCCTTGATGCTCTATGCTCAGCTTAATGATTTTGCAAAGCTTCAAACAGCTAAAGAAGCAACCGGAAATTACTCTGA
TGAAGATTTCATGCGTATTAACCAATTTTACATGGAGACTTCTCAAAACCAAGCGATTTATCAGGGCTTGACACTGGCTG
GTAAGGAGGCTAGTTTGGAGTATATGGGTGTCTATGTGCTTCAGGTTGCTGATGATTCTAGCTTCAAGAGTGTCCTCAAT
ATCGCTGATACGGTGACGGCTGTTAATGGCAAGACCTTTGATAATTCTACTGACTTGATTAAATACGTTCAAGGGCTTAA
GTTGGGTTCAAAAGTCAAGGTCACTTATACGACAGATGACAAAGAAAAGACTGCTACTGGTAAGATTATTAAGATCGCCA
ATGGCAAAAATGGTATTGGTATCGGCCTAACGGACCATACTGAGGTCAAGAGTCCTGAGAATGTTAAGTTTAAACTAGAT
GGTGTTGGCGGACCGAGCGCTGGTCTTATGTTTACCTTAGCTATTTACGATCAGGTGTCTGGTCAAGATCTTAAGGCTGG
TCGTAAGATTGCTGGGACAGGAACTATTGAAAAAGATGGTTCGGTTGGTGATATCGGTGGTGCCTACCTTAAGGTGAAAT
CAGCGGCTGATAGTGGCGCAGACATTTTCTTCGTGCCAAATAATCCAGTAACTAAGGAAATGAAAAAGGTTGATCCGGAT
GCCAAGACTAATTATCAAGAGGCCAAGGAAGCTGCCAAGAAACTGAGGACCAAGATGAAAATCGTCCCTATTAAAACAGC
TCAAGAAGCCATTGATTATTTGAAAAAAACTAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A448ACF9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

64.809

95.251

0.617


Multiple sequence alignment