Detailed information NTG1119864

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: EL076_RS01100
• Genome accession: NZ_LR134275
• Coordinates: 188942..189982 (+)
• Length: 346 a.a.
• NCBI ID: WP_037621603.1
• Uniprot ID: -
• Organism: Streptococcus vestibularis strain NCTC12167
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 183942..194982

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL076_RS01085 (NCTC12167_00212)	-	185195..186841 (+)	1647	WP_003098122.1	peptide ABC transporter substrate-binding protein	-
EL076_RS01090 (NCTC12167_00213)	-	186972..187886 (+)	915	WP_126428943.1	ABC transporter permease	-
EL076_RS01095 (NCTC12167_00214)	-	187897..188928 (+)	1032	WP_408055269.1	ABC transporter permease	-
EL076_RS01100 (NCTC12167_00215)	oppD	188942..189982 (+)	1041	WP_037621603.1	ABC transporter ATP-binding protein	Regulator
EL076_RS01105 (NCTC12167_00216)	amiF	189984..190922 (+)	939	WP_003098114.1	ABC transporter ATP-binding protein	Regulator
EL076_RS10155	-	191151..191315 (+)	165	WP_003098113.1	hypothetical protein	-
EL076_RS01115 (NCTC12167_00217)	hslO	191433..192299 (+)	867	WP_002883609.1	Hsp33 family molecular chaperone HslO	-
EL076_RS01120 (NCTC12167_00218)	dusB	192292..193269 (+)	978	WP_117647330.1	tRNA dihydrouridine synthase DusB	-
EL076_RS01125 (NCTC12167_00219)	-	193498..194766 (+)	1269	WP_003095034.1	hypothetical protein	-

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 38603.38 Da
• Isoelectric Point: 5.2702

>NTDB_id=1119864 EL076_RS01100 WP_037621603.1 188942..189982(+) (oppD) [Streptococcus vestibularis strain NCTC12167]
MMKETILSVKNLHVNFHTYAGEVKAIRDVNFDLKKGETLAIVGESGSGKSVTTRTLMGLSDKNAKVTGDITFKGHDMQAL
KEEDWVKVRGNDIAMIFQDPMTSLDPTMKIGRQIAEPIMIHTKVSQKEALDMALQLMKDVGIPNAEEHINDYPHQWSGGM
RQRAVIAIALAADPEILIADEPTTALDVTIQAQILHLMKKIQEERDSSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYNPQHPYTWGLLNSMPTTETESGSLEAIPGTPPDLLYPPKGDAFATRNVFALDIDYQEEPPMFKVSDTHFAATWLL
DERAPKVTPPSPILKRWEKWSKMKEK

Nucleotide

• Length: 1041 bp

>NTDB_id=1119864 EL076_RS01100 WP_037621603.1 188942..189982(+) (oppD) [Streptococcus vestibularis strain NCTC12167]
ATGATGAAAGAAACGATTTTAAGTGTAAAAAATCTCCATGTTAATTTTCATACTTACGCTGGAGAAGTAAAAGCGATTCG
TGATGTCAATTTTGACTTGAAAAAAGGTGAGACACTGGCAATTGTTGGTGAGTCTGGTTCAGGAAAATCTGTAACGACAA
GGACGCTAATGGGTCTATCAGACAAAAACGCTAAGGTAACTGGAGACATTACCTTTAAAGGGCATGATATGCAAGCCTTG
AAGGAGGAAGATTGGGTTAAAGTTCGTGGAAATGATATTGCTATGATTTTTCAAGATCCCATGACCAGTCTTGACCCTAC
TATGAAAATTGGGCGCCAAATTGCTGAGCCTATCATGATTCATACCAAAGTATCTCAGAAAGAAGCCTTAGATATGGCTT
TACAATTAATGAAAGATGTTGGGATACCTAATGCCGAAGAACATATAAATGACTACCCTCACCAATGGTCAGGAGGAATG
CGTCAAAGAGCAGTAATTGCCATTGCTCTAGCTGCAGATCCTGAAATTTTGATTGCTGATGAGCCTACTACAGCTTTAGA
TGTTACGATTCAAGCACAAATTCTTCATCTGATGAAAAAAATCCAAGAAGAGCGTGATTCATCCATTATTTTTATTACTC
ATGACTTGGGTGTTGTCGCTGGGATGGCTGATCGTGTGGCGGTTATGTATGCTGGTAAAATTGTGGAATATGGGACTGTG
GATGAGGTTTTCTATAATCCGCAACACCCATACACATGGGGACTTCTTAACTCTATGCCTACAACAGAAACAGAATCTGG
CAGCCTAGAAGCTATTCCAGGAACTCCTCCAGATTTGCTTTATCCTCCTAAAGGTGATGCCTTTGCTACTCGAAATGTCT
TTGCTTTAGATATTGATTATCAGGAAGAACCGCCAATGTTTAAAGTATCAGATACGCATTTTGCAGCAACATGGCTCTTA
GATGAACGAGCTCCTAAAGTAACCCCTCCTTCACCAATATTGAAACGATGGGAAAAATGGTCAAAGATGAAGGAGAAATA
A

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (27-183)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-296)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	81.977	99.422	0.815
amiE	Streptococcus salivarius strain HSISS4	57.227	97.977	0.561
amiE	Streptococcus thermophilus LMG 18311	56.637	97.977	0.555
amiE	Streptococcus thermophilus LMD-9	56.637	97.977	0.555