Detailed information NTG1119832

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: EL086_RS07545
• Genome accession: NZ_LR134274
• Coordinates: 1655131..1656057 (-)
• Length: 308 a.a.
• NCBI ID: WP_038676509.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain NCTC8618
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1650131..1661057

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL086_RS07515 (NCTC8618_03929)	-	1650210..1651004 (-)	795	WP_038676501.1	HAD family hydrolase	-
EL086_RS07520 (NCTC8618_03930)	-	1651186..1651563 (+)	378	WP_022496273.1	GntR family transcriptional regulator	-
EL086_RS07525 (NCTC8618_03931)	-	1651568..1652266 (+)	699	WP_038676503.1	ABC transporter ATP-binding protein	-
EL086_RS07530 (NCTC8618_03932)	-	1652278..1653063 (+)	786	WP_021143813.1	hypothetical protein	-
EL086_RS07535 (NCTC8618_03933)	amiF	1653114..1654043 (-)	930	WP_038676505.1	ATP-binding cassette domain-containing protein	Regulator
EL086_RS07540 (NCTC8618_03934)	amiE	1654036..1655121 (-)	1086	WP_038676507.1	ABC transporter ATP-binding protein	Regulator
EL086_RS07545 (NCTC8618_03935)	amiD	1655131..1656057 (-)	927	WP_038676509.1	oligopeptide ABC transporter permease OppC	Regulator
EL086_RS07550 (NCTC8618_03936)	amiC	1656057..1657550 (-)	1494	WP_038676511.1	ABC transporter permease	Regulator
EL086_RS07555 (NCTC8618_03937)	amiA	1657611..1659581 (-)	1971	WP_038676513.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34619.74 Da
• Isoelectric Point: 9.7054

>NTDB_id=1119832 EL086_RS07545 WP_038676509.1 1655131..1656057(-) (amiD) [Streptococcus salivarius strain NCTC8618]
MASIDKSKFQFVKRDDFASETIDAPAYSYWKSVMRQFFKKKSTTVMLGILIAIILMSFIYPMFSKFDFNDVSKVNDFSVR
YVHPNAQYWFGTDSNGKSLFDSVWFGARNSILIAVIATFLNVVIGLLVGAVWGISKTFDMIMMEIYNIISNIPALLVVIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRTLGTPTPKIVVKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGPPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=1119832 EL086_RS07545 WP_038676509.1 1655131..1656057(-) (amiD) [Streptococcus salivarius strain NCTC8618]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCGCCGGCCTA
TTCATACTGGAAATCGGTGATGCGTCAGTTCTTCAAGAAGAAGTCAACAACTGTCATGTTGGGAATCTTGATTGCTATCA
TTTTGATGAGTTTTATCTACCCGATGTTTTCAAAATTTGACTTTAATGATGTGTCTAAGGTTAATGACTTTAGTGTACGT
TATGTGCATCCAAACGCTCAATACTGGTTCGGTACGGACAGTAATGGTAAGTCCCTCTTCGATAGTGTTTGGTTTGGAGC
TCGTAATTCTATCCTTATTGCTGTTATCGCTACCTTCCTTAACGTTGTTATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCTGCTCTCCTTGTAGTTATCGTC
TTGACTTACTCATTGGGTGCTGGTTTCTGGAATATGATCTTTGCCATGACTGTTACAGGGTGGATTGGTATTGCCTATAC
TATCCGTATTCAAATCATGCGTTACCGTGATTTGGAGTATAACTTGGCTTCTCGTACACTGGGAACACCAACTCCTAAGA
TTGTGGTTAAAAACATCATGCCACAACTAGTGTCAGTTATCGTAACTATGGCTAGTCAGCTCTTGCCAGGATTTATCTCT
TACGAAGCCTTCCTTTCATACTTTGGTTTAGGGCCTCCTGTTACGACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAACGTTACAGTCAATGCTTATCTCTTCTGGATTCCATTGACTACCTTGATCCTCGTTTCCCTTGCTCTCTTTATTG
TCGGTCAAAACTTGGCGGATGCCAGCGACCCACGTACGCATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-70)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	98.701	100	0.987
amiD	Streptococcus thermophilus LMG 18311	96.429	100	0.964
amiD	Streptococcus thermophilus LMD-9	96.429	100	0.964