Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | EL086_RS00540 | Genome accession | NZ_LR134274 |
| Coordinates | 89582..92032 (+) | Length | 816 a.a. |
| NCBI ID | WP_022496764.1 | Uniprot ID | A0AB33ZC83 |
| Organism | Streptococcus salivarius strain NCTC8618 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 84582..97032
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL086_RS00515 (NCTC8618_02517) | ahpC | 85478..86038 (-) | 561 | WP_022496765.1 | alkyl hydroperoxide reductase subunit C | - |
| EL086_RS00520 (NCTC8618_02518) | rpsB | 86311..87078 (+) | 768 | WP_002886342.1 | 30S ribosomal protein S2 | - |
| EL086_RS00525 (NCTC8618_02519) | tsf | 87189..88229 (+) | 1041 | WP_002886343.1 | translation elongation factor Ts | - |
| EL086_RS00530 (NCTC8618_02520) | - | 88338..88808 (-) | 471 | WP_004182164.1 | COG2426 family protein | - |
| EL086_RS00535 (NCTC8618_02521) | - | 89126..89581 (+) | 456 | WP_014633783.1 | CtsR family transcriptional regulator | - |
| EL086_RS00540 (NCTC8618_02522) | clpC | 89582..92032 (+) | 2451 | WP_022496764.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| EL086_RS00545 (NCTC8618_02523) | pbp3 | 92162..93418 (-) | 1257 | WP_022496763.1 | D-alanyl-D-alanine carboxypeptidase PBP3 | - |
| EL086_RS00550 (NCTC8618_02524) | pbp3 | 93563..94810 (-) | 1248 | WP_022496762.1 | D-alanyl-D-alanine carboxypeptidase PBP3 | - |
Sequence
Protein
Download Length: 816 a.a. Molecular weight: 90138.49 Da Isoelectric Point: 6.0145
>NTDB_id=1119793 EL086_RS00540 WP_022496764.1 89582..92032(+) (clpC) [Streptococcus salivarius strain NCTC8618]
MTTYSRKMQAIFHRAQLEAERFGSPFLETWHVLLAMVEVPGSVAYLTFTDFEDRIRAEEIETAAVLAMEKSPKDLSESDI
IDLRAQSHALGAMLQEAEGIASVTGAVEVGSEHVLMAFLLHKDLMVCRLLEVAGFQYKDDSDKPRIIDLRRSLERYAGLS
KQDLKAIHDLRKPKKSKASGNFANMMQPPQSSTGELSDYTKDLTAVAESGALDPVIGREKEISRMIQVLSRKTKNNPVLV
GEAGVGKTALALGLAQRIASGEVPFELADMRILELDMMSVVAGTRFRGDFEERMNQIIDEIEADGKIILFIDELHTIIGS
GSGIDSTLDAANILKPALARGTLHMVGATTQAEYQKHIEKDAALSRRFAKITIEEPSVAEAIDILKGLRSSYEDYHRVTI
TDEAVETAVKAAHRYLTSKNLPDSAIDLLDEASATVQGRIKKEAKLEITPLDEALLSGDMKAAVKQYKASQKAKLPKPAL
VDADQIMQTLSRLSGIPVEKMTQADSKRYLNLEAELHKRVIGQDEAVSAISRAIRRNQSGIRTGKRPIGSFMFLGPTGVG
KTELAKALAEVLFDDESALLRFDMSEYMEKFAASRLNGAPPGYVGYDEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNIL
LQVLDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGARDISHNHQAMQSRIMEELKKAYRPEFINRIDEKVV
FHSLEEEQLREIVKIMVKPLVSALAEKGIDLKFQPAALKHLAKDGYDVEMGARPLRRTIQTQVEDKLSELLLGGQVVSGQ
TLKIGCSKDKLTFTVV
MTTYSRKMQAIFHRAQLEAERFGSPFLETWHVLLAMVEVPGSVAYLTFTDFEDRIRAEEIETAAVLAMEKSPKDLSESDI
IDLRAQSHALGAMLQEAEGIASVTGAVEVGSEHVLMAFLLHKDLMVCRLLEVAGFQYKDDSDKPRIIDLRRSLERYAGLS
KQDLKAIHDLRKPKKSKASGNFANMMQPPQSSTGELSDYTKDLTAVAESGALDPVIGREKEISRMIQVLSRKTKNNPVLV
GEAGVGKTALALGLAQRIASGEVPFELADMRILELDMMSVVAGTRFRGDFEERMNQIIDEIEADGKIILFIDELHTIIGS
GSGIDSTLDAANILKPALARGTLHMVGATTQAEYQKHIEKDAALSRRFAKITIEEPSVAEAIDILKGLRSSYEDYHRVTI
TDEAVETAVKAAHRYLTSKNLPDSAIDLLDEASATVQGRIKKEAKLEITPLDEALLSGDMKAAVKQYKASQKAKLPKPAL
VDADQIMQTLSRLSGIPVEKMTQADSKRYLNLEAELHKRVIGQDEAVSAISRAIRRNQSGIRTGKRPIGSFMFLGPTGVG
KTELAKALAEVLFDDESALLRFDMSEYMEKFAASRLNGAPPGYVGYDEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNIL
LQVLDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGARDISHNHQAMQSRIMEELKKAYRPEFINRIDEKVV
FHSLEEEQLREIVKIMVKPLVSALAEKGIDLKFQPAALKHLAKDGYDVEMGARPLRRTIQTQVEDKLSELLLGGQVVSGQ
TLKIGCSKDKLTFTVV
Nucleotide
Download Length: 2451 bp
>NTDB_id=1119793 EL086_RS00540 WP_022496764.1 89582..92032(+) (clpC) [Streptococcus salivarius strain NCTC8618]
ATGACGACATATTCAAGAAAAATGCAGGCCATTTTCCATCGTGCTCAGCTTGAGGCAGAGCGTTTTGGAAGTCCTTTCTT
GGAGACTTGGCATGTGCTTCTGGCTATGGTTGAGGTTCCAGGATCTGTAGCCTACCTAACATTTACTGATTTTGAGGACC
GTATTCGTGCGGAAGAGATTGAGACCGCTGCTGTACTAGCGATGGAGAAAAGTCCAAAAGACTTGTCTGAATCAGATATT
ATCGATTTACGTGCACAGTCACATGCTTTAGGGGCTATGTTGCAAGAGGCAGAGGGAATTGCTAGTGTAACTGGTGCTGT
AGAGGTAGGGTCTGAACATGTATTGATGGCCTTTCTCCTTCATAAGGATTTGATGGTTTGTCGTCTCCTTGAAGTTGCTG
GTTTTCAATATAAGGATGACAGCGATAAGCCTCGCATTATCGATTTACGACGTTCTTTGGAGCGTTACGCAGGTCTTAGT
AAGCAAGATTTGAAGGCCATTCACGACCTTCGTAAGCCTAAAAAGTCAAAGGCATCAGGTAATTTTGCTAATATGATGCA
GCCTCCTCAATCTTCTACTGGGGAACTGTCAGATTACACAAAAGACTTAACGGCAGTAGCCGAGTCAGGTGCTCTTGATC
CTGTTATTGGACGTGAGAAAGAAATTTCACGCATGATTCAGGTTTTGAGTCGTAAAACGAAGAATAACCCAGTTCTTGTG
GGTGAAGCAGGTGTTGGTAAGACGGCACTTGCGCTTGGCTTAGCACAGCGTATTGCTTCAGGCGAAGTACCTTTTGAGTT
GGCTGATATGCGTATCTTAGAGCTTGATATGATGAGTGTGGTTGCAGGAACACGTTTCCGTGGCGATTTCGAAGAACGTA
TGAATCAGATCATTGATGAGATTGAAGCTGATGGAAAAATCATTCTCTTTATTGACGAATTGCATACGATTATCGGTTCT
GGTTCAGGTATTGATAGTACCTTAGATGCGGCGAATATTTTGAAACCCGCTCTAGCACGTGGAACCCTTCATATGGTTGG
AGCAACTACTCAAGCTGAGTACCAGAAGCATATTGAGAAAGATGCAGCTCTTTCTCGCCGTTTTGCTAAGATTACAATCG
AGGAGCCAAGTGTAGCTGAGGCGATTGATATTCTAAAAGGCCTACGGTCGTCTTATGAAGACTATCATCGTGTAACGATT
ACTGATGAGGCGGTTGAGACAGCAGTCAAGGCAGCCCACCGTTATTTGACGAGTAAAAACTTACCTGACTCTGCCATTGA
CCTTTTAGATGAAGCGAGTGCAACTGTTCAAGGTCGTATCAAAAAAGAAGCCAAACTTGAAATAACGCCTTTGGACGAAG
CGCTTCTATCTGGTGATATGAAGGCTGCTGTTAAACAATATAAGGCTAGCCAAAAAGCAAAATTACCAAAACCTGCCTTG
GTAGATGCAGATCAGATTATGCAAACCCTTAGTCGTCTATCAGGTATTCCTGTTGAGAAGATGACTCAGGCAGATAGCAA
GCGTTACTTGAATCTGGAAGCAGAGCTTCACAAACGTGTTATTGGTCAAGACGAAGCAGTTTCAGCGATTAGTCGTGCTA
TTCGTCGTAACCAGTCAGGTATTCGTACTGGCAAACGTCCGATTGGTTCCTTCATGTTCCTTGGACCTACTGGTGTTGGT
AAGACAGAATTGGCCAAGGCTTTGGCGGAGGTTCTCTTTGATGATGAGTCAGCTTTGCTTCGCTTTGACATGTCAGAATA
CATGGAAAAATTTGCGGCTAGCCGCCTTAACGGTGCTCCTCCAGGTTATGTTGGATATGATGAGGGTGGTGAGTTAACAG
AAAAAGTTCGTAACAAGCCTTACTCAGTTCTTCTTTTTGACGAGGTAGAAAAGGCTCACCCAGACATTTTCAACATTCTC
TTACAGGTTTTGGATGATGGTGTCTTGACGGATAGTCGAGGTCGTAAAGTCGACTTCTCAAATACCATTATCATAATGAC
TTCGAACTTGGGGGCGACTGCTCTTCGCGATGATAAGACTGTTGGTTTTGGTGCTCGAGACATTTCTCATAATCATCAAG
CTATGCAGTCACGTATCATGGAAGAGCTTAAGAAGGCCTACCGTCCAGAGTTTATCAACCGTATTGATGAGAAGGTTGTC
TTCCATAGCTTAGAGGAAGAACAGCTTCGTGAGATTGTCAAAATTATGGTAAAACCGTTGGTTTCAGCTTTGGCTGAAAA
AGGGATTGACTTGAAATTCCAACCAGCTGCCCTCAAGCATTTGGCTAAAGATGGCTATGATGTTGAGATGGGTGCTCGTC
CATTACGTCGCACGATTCAAACTCAGGTTGAGGATAAGTTATCTGAGCTCTTACTAGGCGGCCAAGTAGTGAGTGGACAA
ACCCTTAAGATTGGTTGTTCGAAAGATAAATTAACCTTTACAGTAGTGTAA
ATGACGACATATTCAAGAAAAATGCAGGCCATTTTCCATCGTGCTCAGCTTGAGGCAGAGCGTTTTGGAAGTCCTTTCTT
GGAGACTTGGCATGTGCTTCTGGCTATGGTTGAGGTTCCAGGATCTGTAGCCTACCTAACATTTACTGATTTTGAGGACC
GTATTCGTGCGGAAGAGATTGAGACCGCTGCTGTACTAGCGATGGAGAAAAGTCCAAAAGACTTGTCTGAATCAGATATT
ATCGATTTACGTGCACAGTCACATGCTTTAGGGGCTATGTTGCAAGAGGCAGAGGGAATTGCTAGTGTAACTGGTGCTGT
AGAGGTAGGGTCTGAACATGTATTGATGGCCTTTCTCCTTCATAAGGATTTGATGGTTTGTCGTCTCCTTGAAGTTGCTG
GTTTTCAATATAAGGATGACAGCGATAAGCCTCGCATTATCGATTTACGACGTTCTTTGGAGCGTTACGCAGGTCTTAGT
AAGCAAGATTTGAAGGCCATTCACGACCTTCGTAAGCCTAAAAAGTCAAAGGCATCAGGTAATTTTGCTAATATGATGCA
GCCTCCTCAATCTTCTACTGGGGAACTGTCAGATTACACAAAAGACTTAACGGCAGTAGCCGAGTCAGGTGCTCTTGATC
CTGTTATTGGACGTGAGAAAGAAATTTCACGCATGATTCAGGTTTTGAGTCGTAAAACGAAGAATAACCCAGTTCTTGTG
GGTGAAGCAGGTGTTGGTAAGACGGCACTTGCGCTTGGCTTAGCACAGCGTATTGCTTCAGGCGAAGTACCTTTTGAGTT
GGCTGATATGCGTATCTTAGAGCTTGATATGATGAGTGTGGTTGCAGGAACACGTTTCCGTGGCGATTTCGAAGAACGTA
TGAATCAGATCATTGATGAGATTGAAGCTGATGGAAAAATCATTCTCTTTATTGACGAATTGCATACGATTATCGGTTCT
GGTTCAGGTATTGATAGTACCTTAGATGCGGCGAATATTTTGAAACCCGCTCTAGCACGTGGAACCCTTCATATGGTTGG
AGCAACTACTCAAGCTGAGTACCAGAAGCATATTGAGAAAGATGCAGCTCTTTCTCGCCGTTTTGCTAAGATTACAATCG
AGGAGCCAAGTGTAGCTGAGGCGATTGATATTCTAAAAGGCCTACGGTCGTCTTATGAAGACTATCATCGTGTAACGATT
ACTGATGAGGCGGTTGAGACAGCAGTCAAGGCAGCCCACCGTTATTTGACGAGTAAAAACTTACCTGACTCTGCCATTGA
CCTTTTAGATGAAGCGAGTGCAACTGTTCAAGGTCGTATCAAAAAAGAAGCCAAACTTGAAATAACGCCTTTGGACGAAG
CGCTTCTATCTGGTGATATGAAGGCTGCTGTTAAACAATATAAGGCTAGCCAAAAAGCAAAATTACCAAAACCTGCCTTG
GTAGATGCAGATCAGATTATGCAAACCCTTAGTCGTCTATCAGGTATTCCTGTTGAGAAGATGACTCAGGCAGATAGCAA
GCGTTACTTGAATCTGGAAGCAGAGCTTCACAAACGTGTTATTGGTCAAGACGAAGCAGTTTCAGCGATTAGTCGTGCTA
TTCGTCGTAACCAGTCAGGTATTCGTACTGGCAAACGTCCGATTGGTTCCTTCATGTTCCTTGGACCTACTGGTGTTGGT
AAGACAGAATTGGCCAAGGCTTTGGCGGAGGTTCTCTTTGATGATGAGTCAGCTTTGCTTCGCTTTGACATGTCAGAATA
CATGGAAAAATTTGCGGCTAGCCGCCTTAACGGTGCTCCTCCAGGTTATGTTGGATATGATGAGGGTGGTGAGTTAACAG
AAAAAGTTCGTAACAAGCCTTACTCAGTTCTTCTTTTTGACGAGGTAGAAAAGGCTCACCCAGACATTTTCAACATTCTC
TTACAGGTTTTGGATGATGGTGTCTTGACGGATAGTCGAGGTCGTAAAGTCGACTTCTCAAATACCATTATCATAATGAC
TTCGAACTTGGGGGCGACTGCTCTTCGCGATGATAAGACTGTTGGTTTTGGTGCTCGAGACATTTCTCATAATCATCAAG
CTATGCAGTCACGTATCATGGAAGAGCTTAAGAAGGCCTACCGTCCAGAGTTTATCAACCGTATTGATGAGAAGGTTGTC
TTCCATAGCTTAGAGGAAGAACAGCTTCGTGAGATTGTCAAAATTATGGTAAAACCGTTGGTTTCAGCTTTGGCTGAAAA
AGGGATTGACTTGAAATTCCAACCAGCTGCCCTCAAGCATTTGGCTAAAGATGGCTATGATGTTGAGATGGGTGCTCGTC
CATTACGTCGCACGATTCAAACTCAGGTTGAGGATAAGTTATCTGAGCTCTTACTAGGCGGCCAAGTAGTGAGTGGACAA
ACCCTTAAGATTGGTTGTTCGAAAGATAAATTAACCTTTACAGTAGTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus thermophilus LMG 18311 |
95.098 |
100 |
0.951 |
| clpC | Streptococcus thermophilus LMD-9 |
94.975 |
100 |
0.95 |
| clpC | Streptococcus mutans UA159 |
73.039 |
100 |
0.73 |
| clpC | Streptococcus pneumoniae TIGR4 |
67.525 |
100 |
0.675 |
| clpC | Streptococcus pneumoniae Rx1 |
67.525 |
100 |
0.675 |
| clpC | Streptococcus pneumoniae D39 |
67.525 |
100 |
0.675 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.464 |
100 |
0.509 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
46.902 |
100 |
0.473 |
| clpE | Streptococcus mutans UA159 |
47.673 |
76.348 |
0.364 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
44.781 |
81.005 |
0.363 |