Detailed information    

insolico Bioinformatically predicted

Overview


Name   comS   Type   Regulator
Locus tag   EL077_RS10045 Genome accession   NZ_LR134273
Coordinates   48752..48850 (+) Length   32 a.a.
NCBI ID   WP_200831644.1    Uniprot ID   A0A380KSQ5
Organism   Streptococcus equi subsp. equi strain NCTC12091     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context


Location: 43752..53850
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL077_RS00260 (NCTC12091_00052) purE 43918..44406 (+) 489 WP_037582413.1 5-(carboxyamino)imidazole ribonucleotide mutase -
  EL077_RS00265 (NCTC12091_00053) purK 44393..45484 (+) 1092 WP_037582412.1 5-(carboxyamino)imidazole ribonucleotide synthase -
  EL077_RS00270 (NCTC12091_00054) - 45494..45718 (+) 225 WP_037582407.1 hypothetical protein -
  EL077_RS09820 - 45743..45847 (+) 105 WP_370444775.1 hypothetical protein -
  EL077_RS00275 (NCTC12091_00055) purB 46164..47456 (+) 1293 WP_037582405.1 adenylosuccinate lyase -
  EL077_RS00280 (NCTC12091_00056) comR 47755..48669 (+) 915 WP_111677624.1 helix-turn-helix domain-containing protein Regulator
  EL077_RS10045 (NCTC12091_00057) comS 48752..48850 (+) 99 WP_200831644.1 quorum-sensing system DWW-type pheromone Regulator
  EL077_RS00285 (NCTC12091_00058) ruvB 48884..49885 (+) 1002 WP_111677625.1 Holliday junction branch migration DNA helicase RuvB -
  EL077_RS00290 (NCTC12091_00059) - 50178..50636 (+) 459 WP_126436186.1 low molecular weight protein-tyrosine-phosphatase -
  EL077_RS00295 (NCTC12091_00060) - 50642..51043 (+) 402 WP_037582396.1 membrane protein -
  EL077_RS00300 (NCTC12091_00061) - 51040..52821 (+) 1782 WP_126436188.1 acyltransferase family protein -

Sequence


Protein


Download         Length: 32 a.a.        Molecular weight: 3869.63 Da        Isoelectric Point: 8.5430

>NTDB_id=1119789 EL077_RS10045 WP_200831644.1 48752..48850(+) (comS) [Streptococcus equi subsp. equi strain NCTC12091]
MFKKYQYYLLLAALLLLHSAQLLSDIDWWRVG

Nucleotide


Download         Length: 99 bp        

>NTDB_id=1119789 EL077_RS10045 WP_200831644.1 48752..48850(+) (comS) [Streptococcus equi subsp. equi strain NCTC12091]
ATGTTTAAAAAATATCAATACTATCTGCTTTTAGCTGCTTTACTTCTACTTCATTCTGCCCAATTACTTAGTGATATTGA
CTGGTGGCGTGTTGGTTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A380KSQ5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS8232

56.667

93.75

0.531

  comS Streptococcus pyogenes MGAS315

40.625

100

0.406


Multiple sequence alignment