Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   EL077_RS09810 Genome accession   NZ_LR134273
Coordinates   2080932..2081705 (+) Length   257 a.a.
NCBI ID   WP_126437177.1    Uniprot ID   -
Organism   Streptococcus equi subsp. equi strain NCTC12091     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2075932..2086705
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL077_RS09800 (NCTC12091_01985) rlmH 2078895..2079374 (-) 480 WP_012678751.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  EL077_RS09805 (NCTC12091_01986) htrA 2079584..2080807 (+) 1224 WP_126437175.1 S1C family serine protease Regulator
  EL077_RS09810 (NCTC12091_01987) spo0J 2080932..2081705 (+) 774 WP_126437177.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 257 a.a.        Molecular weight: 29087.81 Da        Isoelectric Point: 9.8971

>NTDB_id=1119787 EL077_RS09810 WP_126437177.1 2080932..2081705(+) (spo0J) [Streptococcus equi subsp. equi strain NCTC12091]
MTEILMHIPIEDIVANPYQPRLQFNQKELEELAHSIQANGLIQPIIVRKSDVFGYELVAGERRFKAAKLAGLQKIPAIVK
EMSTLESMQQAIVENLQRSNLNAIEEAKAYQLLIDKNKMTHEDIAAYMGKSRPYISNTIRLLQLPDVIKQAIEDGTISAG
HARALLSLSTPKEQELYFHNILDQGLSVRQIEQLVKAKHHPKKRSKHKTIFVKSLEKELSKSLGLPVALSLKKNDSGQLQ
LSFSNQEELNRIINKLL

Nucleotide


Download         Length: 774 bp        

>NTDB_id=1119787 EL077_RS09810 WP_126437177.1 2080932..2081705(+) (spo0J) [Streptococcus equi subsp. equi strain NCTC12091]
ATGACAGAAATCCTAATGCACATTCCTATCGAGGATATTGTGGCAAATCCTTATCAACCACGTCTTCAATTTAATCAAAA
AGAGCTTGAAGAGCTGGCACATTCCATTCAGGCTAATGGTTTGATTCAACCAATCATTGTCAGAAAATCTGATGTATTTG
GCTATGAATTAGTCGCTGGAGAACGACGCTTTAAAGCAGCCAAGCTGGCAGGACTTCAAAAGATTCCAGCAATTGTTAAG
GAAATGTCTACTCTTGAGAGCATGCAGCAGGCCATCGTAGAAAACCTACAGCGCTCAAATTTAAATGCTATTGAAGAGGC
TAAGGCCTATCAATTACTCATTGATAAAAATAAGATGACCCATGAGGACATCGCAGCATACATGGGAAAATCACGCCCTT
ATATCAGCAACACCATCAGGCTGCTGCAACTACCAGACGTTATTAAACAAGCGATTGAGGACGGTACCATTAGTGCTGGA
CATGCAAGAGCCTTATTATCCTTGTCAACACCAAAAGAGCAGGAGCTTTATTTTCACAACATTCTGGATCAAGGCTTAAG
CGTTAGGCAAATCGAACAGCTGGTAAAAGCTAAGCATCACCCCAAAAAAAGAAGCAAACATAAAACCATTTTTGTGAAAT
CTTTAGAAAAAGAGCTCTCAAAATCATTAGGATTACCTGTGGCATTGTCTCTCAAAAAAAATGACAGTGGGCAGCTGCAA
CTGTCATTTTCAAACCAAGAAGAATTGAACAGAATTATCAACAAGCTGCTTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

61.719

99.611

0.615


Multiple sequence alignment