Detailed information NTG1119577

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: EL081_RS05590
• Genome accession: NZ_LR134266
• Coordinates: 1045103..1046335 (-)
• Length: 410 a.a.
• NCBI ID: WP_023023314.1
• Uniprot ID: A0A7X3AWQ0
• Organism: Streptococcus viridans strain NCTC3166
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1040103..1051335

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL081_RS10220 (NCTC3166_01106)	-	1041017..1041139 (-)	123	WP_126404282.1	hypothetical protein	-
EL081_RS05560	-	1041199..1041450 (-)	252	WP_126404283.1	hypothetical protein	-
EL081_RS05565 (NCTC3166_01108)	rplL	1041480..1041848 (-)	369	WP_061564003.1	50S ribosomal protein L7/L12	-
EL081_RS05570 (NCTC3166_01109)	rplJ	1041925..1042425 (-)	501	WP_126404284.1	50S ribosomal protein L10	-
EL081_RS05575 (NCTC3166_01111)	-	1042661..1043458 (-)	798	WP_126404285.1	formate/nitrite transporter family protein	-
EL081_RS05580 (NCTC3166_01112)	-	1043650..1044321 (-)	672	WP_232011430.1	glucosaminidase domain-containing protein	-
EL081_RS05585 (NCTC3166_01113)	yihA	1044495..1045091 (-)	597	WP_023023313.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
EL081_RS05590 (NCTC3166_01114)	clpX	1045103..1046335 (-)	1233	WP_023023314.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
EL081_RS05600 (NCTC3166_01116)	-	1046546..1047058 (-)	513	WP_023023315.1	dihydrofolate reductase	-

Sequence

Protein

• Length: 410 a.a.
• Molecular weight: 45540.99 Da
• Isoelectric Point: 4.3434

>NTDB_id=1119577 EL081_RS05590 WP_023023314.1 1045103..1046335(-) (clpX) [Streptococcus viridans strain NCTC3166]
MPTNQSNDMMVYCSFCGKNQDEVQKIIAGNNAFICNECVELAQEIIREELAEEVLADLSEVPKPIELLNILNHYVIGQDR
AKRALAVAVYNHYKRINFHENREDDNDVDLQKSNILMVGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVEN
ILLKLLQAADFNIERAERGIIYVDEIDKIAKKSENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT
KNILFIVGGAFDGIEEIVKQRLGEKIIGFGQNNKAIDESSSYMQEIIAEDIQKFGIIPELIGRLPVLAALEQLTVDDLVR
ILKEPRNALVKQYQALLSFDDVELEFDDEALEEIASKAIERKTGARGLRSIIEETMLDVMFEVPSQEDVKMVRITKEAVN
GTEKPILETA

Nucleotide

• Length: 1233 bp

>NTDB_id=1119577 EL081_RS05590 WP_023023314.1 1045103..1046335(-) (clpX) [Streptococcus viridans strain NCTC3166]
ATGCCTACAAATCAATCAAACGATATGATGGTTTATTGTTCGTTTTGTGGTAAGAACCAAGACGAAGTACAGAAGATTAT
TGCTGGGAACAATGCCTTTATCTGTAATGAATGTGTTGAGTTAGCTCAAGAAATCATTCGAGAAGAATTAGCTGAGGAAG
TCTTGGCAGACCTTTCAGAGGTTCCAAAACCAATCGAACTTCTCAATATCCTTAACCACTATGTCATCGGTCAAGATCGT
GCTAAACGAGCACTAGCAGTAGCTGTCTACAATCACTACAAACGGATTAACTTCCACGAAAATCGTGAAGATGACAACGA
TGTGGATCTACAAAAATCAAACATTTTGATGGTCGGTCCTACAGGTTCAGGAAAAACTTTCTTAGCTCAAACGCTTGCTA
AGAGTTTAAATGTGCCATTTGCCATCGCCGATGCAACAGCCTTGACAGAAGCGGGTTACGTCGGAGAAGACGTTGAGAAC
ATCCTTCTTAAGCTCTTGCAAGCAGCTGATTTCAATATCGAACGTGCTGAGCGAGGCATCATCTATGTTGATGAAATCGA
TAAGATTGCCAAGAAGAGTGAGAACGTCTCGATTACTCGTGATGTATCTGGTGAAGGGGTACAGCAAGCCCTCTTGAAGA
TCATCGAGGGTACTGTAGCGAGTGTTCCACCTCAAGGCGGACGCAAGCATCCTCAACAAGAGATGATCCAAGTTGACACC
AAAAACATTCTTTTCATCGTTGGTGGAGCCTTTGATGGAATTGAAGAAATTGTGAAACAACGTCTAGGTGAAAAGATTAT
TGGGTTTGGTCAAAACAACAAAGCCATTGATGAATCCAGCTCTTACATGCAAGAAATCATTGCAGAAGATATCCAAAAAT
TCGGTATTATTCCTGAGTTAATCGGTCGTCTTCCAGTTCTTGCTGCATTAGAGCAATTGACAGTGGATGACTTGGTTCGT
ATTTTGAAAGAACCAAGAAATGCCTTGGTGAAACAATATCAGGCTCTCTTATCCTTCGATGATGTTGAATTAGAATTTGA
TGACGAAGCGCTAGAAGAAATTGCAAGTAAAGCCATTGAACGCAAGACTGGTGCTCGCGGACTACGCTCCATCATCGAAG
AAACTATGTTGGATGTGATGTTTGAAGTTCCAAGTCAAGAAGACGTCAAAATGGTTCGGATCACCAAAGAAGCAGTTAAC
GGAACTGAAAAACCAATTTTAGAAACTGCCTAG

Domains

Predicted by InterproScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (313-390)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (111-306)

3D structure

• AlphaFold DB: A0A7X3AWQ0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	87.561	100	0.876
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.209	98.049	0.571