Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | EL101_RS07035 | Genome accession | NZ_LR134263 |
| Coordinates | 1475028..1476002 (+) | Length | 324 a.a. |
| NCBI ID | WP_019165230.1 | Uniprot ID | - |
| Organism | Staphylococcus delphini strain NCTC12225 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1470028..1481002
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL101_RS07000 (NCTC12225_01462) | rpmG | 1470419..1470583 (+) | 165 | WP_256726578.1 | 50S ribosomal protein L33 | - |
| EL101_RS07005 (NCTC12225_01463) | - | 1470733..1471272 (+) | 540 | WP_096597003.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| EL101_RS07010 (NCTC12225_01464) | - | 1471291..1472730 (+) | 1440 | WP_096597001.1 | rhomboid family intramembrane serine protease | - |
| EL101_RS07015 (NCTC12225_01465) | - | 1472732..1472935 (+) | 204 | WP_096596999.1 | YqgQ family protein | - |
| EL101_RS07020 (NCTC12225_01466) | - | 1472932..1473918 (+) | 987 | WP_096596997.1 | ROK family glucokinase | - |
| EL101_RS07025 (NCTC12225_01467) | - | 1473919..1474230 (+) | 312 | WP_019165228.1 | MTH1187 family thiamine-binding protein | - |
| EL101_RS07030 (NCTC12225_01468) | - | 1474243..1474872 (+) | 630 | WP_096596995.1 | MBL fold metallo-hydrolase | - |
| EL101_RS07035 (NCTC12225_01469) | comGA | 1475028..1476002 (+) | 975 | WP_019165230.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| EL101_RS07040 (NCTC12225_01470) | comGB | 1475971..1477038 (+) | 1068 | WP_096596993.1 | competence type IV pilus assembly protein ComGB | - |
| EL101_RS07045 (NCTC12225_01471) | comGC | 1477051..1477374 (+) | 324 | WP_096541451.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| EL101_RS07050 (NCTC12225_01472) | comGD | 1477352..1477792 (+) | 441 | WP_096596991.1 | competence type IV pilus minor pilin ComGD | - |
| EL101_RS07060 (NCTC12225_01473) | - | 1478003..1478488 (+) | 486 | WP_119529678.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| EL101_RS07065 | - | 1478652..1479179 (+) | 528 | WP_096596987.1 | shikimate kinase | - |
| EL101_RS07070 (NCTC12225_01476) | gcvT | 1479337..1480428 (+) | 1092 | WP_096596985.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36882.56 Da Isoelectric Point: 7.0185
>NTDB_id=1119444 EL101_RS07035 WP_019165230.1 1475028..1476002(+) (comGA) [Staphylococcus delphini strain NCTC12225]
MQLLLDHVIQFALQNEASDIHFIPSQSQVEVKLRVKDQLVLYDTLNLETYQKLLTLLKYQAGLDISTRHKAQSGRYIYEH
KELYYLRVSTLPLNLGTESCVIRITPQYFQNAKAHSVLDIKSNMEKKQGLILFSGPTGAGKSTLMYQMVVYAKQKLNLNI
ITIEDPVEQLVNGITQISVNEKADITYGSSLKAILRCDPDVILIGEIRDSHIARDVIQASLSGHLVLSTIHANDCQGVLL
RLIEMGLSHQDLSQSINLIINQRLITTKNDQRQLVYETMDQQEIHYFLNNNFQLPTAFTSLSDKLQLLNKEGVIDEKILR
KYTI
MQLLLDHVIQFALQNEASDIHFIPSQSQVEVKLRVKDQLVLYDTLNLETYQKLLTLLKYQAGLDISTRHKAQSGRYIYEH
KELYYLRVSTLPLNLGTESCVIRITPQYFQNAKAHSVLDIKSNMEKKQGLILFSGPTGAGKSTLMYQMVVYAKQKLNLNI
ITIEDPVEQLVNGITQISVNEKADITYGSSLKAILRCDPDVILIGEIRDSHIARDVIQASLSGHLVLSTIHANDCQGVLL
RLIEMGLSHQDLSQSINLIINQRLITTKNDQRQLVYETMDQQEIHYFLNNNFQLPTAFTSLSDKLQLLNKEGVIDEKILR
KYTI
Nucleotide
Download Length: 975 bp
>NTDB_id=1119444 EL101_RS07035 WP_019165230.1 1475028..1476002(+) (comGA) [Staphylococcus delphini strain NCTC12225]
ATGCAACTACTATTAGATCATGTCATACAATTTGCACTTCAAAATGAGGCATCGGACATTCATTTCATCCCTTCACAATC
ACAAGTCGAAGTGAAACTCAGAGTGAAAGATCAACTTGTATTATATGACACATTAAATCTAGAAACGTATCAAAAATTGT
TAACTTTGTTGAAATACCAAGCTGGATTAGATATTTCGACACGCCACAAAGCACAAAGTGGGCGCTATATTTATGAACAT
AAAGAGTTATATTATTTAAGAGTGTCCACGTTGCCTTTAAACTTAGGTACTGAAAGTTGTGTTATTCGTATTACACCCCA
ATATTTTCAAAATGCGAAAGCCCACAGCGTTTTAGACATCAAATCTAATATGGAGAAAAAGCAAGGTTTAATTCTGTTTA
GCGGGCCTACAGGTGCAGGAAAAAGCACGTTAATGTATCAAATGGTCGTCTACGCTAAACAAAAGTTAAACTTGAATATC
ATCACGATAGAAGACCCCGTGGAGCAGCTTGTCAACGGTATTACACAAATTTCCGTTAACGAAAAAGCTGATATTACGTA
TGGGTCATCGTTAAAAGCAATCCTTCGTTGTGATCCAGATGTTATCTTAATTGGTGAAATTCGTGACAGCCATATTGCAA
GGGACGTGATACAAGCGAGTTTAAGCGGACATTTAGTCTTGTCGACGATACACGCCAACGATTGTCAAGGGGTGCTCCTG
AGACTGATTGAAATGGGACTCTCTCACCAAGATCTATCTCAATCCATCAATCTCATCATCAATCAAAGACTCATTACAAC
AAAAAATGACCAGCGACAACTCGTCTATGAAACGATGGATCAACAAGAAATTCACTACTTTTTGAATAATAACTTTCAAC
TACCTACTGCTTTCACAAGCCTTTCTGATAAGCTTCAACTTTTGAATAAAGAGGGGGTTATAGATGAAAAAATTTTACGA
AAGTATACGATTTAA
ATGCAACTACTATTAGATCATGTCATACAATTTGCACTTCAAAATGAGGCATCGGACATTCATTTCATCCCTTCACAATC
ACAAGTCGAAGTGAAACTCAGAGTGAAAGATCAACTTGTATTATATGACACATTAAATCTAGAAACGTATCAAAAATTGT
TAACTTTGTTGAAATACCAAGCTGGATTAGATATTTCGACACGCCACAAAGCACAAAGTGGGCGCTATATTTATGAACAT
AAAGAGTTATATTATTTAAGAGTGTCCACGTTGCCTTTAAACTTAGGTACTGAAAGTTGTGTTATTCGTATTACACCCCA
ATATTTTCAAAATGCGAAAGCCCACAGCGTTTTAGACATCAAATCTAATATGGAGAAAAAGCAAGGTTTAATTCTGTTTA
GCGGGCCTACAGGTGCAGGAAAAAGCACGTTAATGTATCAAATGGTCGTCTACGCTAAACAAAAGTTAAACTTGAATATC
ATCACGATAGAAGACCCCGTGGAGCAGCTTGTCAACGGTATTACACAAATTTCCGTTAACGAAAAAGCTGATATTACGTA
TGGGTCATCGTTAAAAGCAATCCTTCGTTGTGATCCAGATGTTATCTTAATTGGTGAAATTCGTGACAGCCATATTGCAA
GGGACGTGATACAAGCGAGTTTAAGCGGACATTTAGTCTTGTCGACGATACACGCCAACGATTGTCAAGGGGTGCTCCTG
AGACTGATTGAAATGGGACTCTCTCACCAAGATCTATCTCAATCCATCAATCTCATCATCAATCAAAGACTCATTACAAC
AAAAAATGACCAGCGACAACTCGTCTATGAAACGATGGATCAACAAGAAATTCACTACTTTTTGAATAATAACTTTCAAC
TACCTACTGCTTTCACAAGCCTTTCTGATAAGCTTCAACTTTTGAATAAAGAGGGGGTTATAGATGAAAAAATTTTACGA
AAGTATACGATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
58.824 |
99.691 |
0.586 |
| comGA | Staphylococcus aureus N315 |
58.824 |
99.691 |
0.586 |