Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   EL068_RS01190 Genome accession   NZ_LR134242
Coordinates   267145..268041 (+) Length   298 a.a.
NCBI ID   WP_047211220.1    Uniprot ID   -
Organism   Staphylococcus warneri strain NCTC4133     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 262145..273041
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL068_RS01170 (NCTC4133_00239) - 262755..264218 (+) 1464 WP_058709311.1 poly-gamma-glutamate hydrolase family protein -
  EL068_RS01175 (NCTC4133_00240) - 264399..264500 (+) 102 WP_015364644.1 SE2200 family small protein -
  EL068_RS01180 (NCTC4133_00241) - 264583..266037 (-) 1455 WP_126510185.1 alkaline phosphatase -
  EL068_RS11725 (NCTC4133_00242) - 266294..266452 (+) 159 WP_002467360.1 hypothetical protein -
  EL068_RS01185 (NCTC4133_00243) braR 266474..267139 (+) 666 WP_047211221.1 response regulator transcription factor Regulator
  EL068_RS01190 (NCTC4133_00244) braS 267145..268041 (+) 897 WP_047211220.1 sensor histidine kinase Regulator
  EL068_RS01195 (NCTC4133_00245) - 268145..268891 (+) 747 WP_049414576.1 ABC transporter ATP-binding protein -
  EL068_RS01200 (NCTC4133_00246) - 268909..270903 (+) 1995 WP_232013275.1 ABC transporter permease -
  EL068_RS01205 (NCTC4133_00247) - 271026..272213 (+) 1188 WP_232013276.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34357.74 Da        Isoelectric Point: 5.6517

>NTDB_id=1119320 EL068_RS01190 WP_047211220.1 267145..268041(+) (braS) [Staphylococcus warneri strain NCTC4133]
MLLTFIKSIKNEIAIVTFISLLFVLIFFVFSLPQSALMLGVAIILFIMCIYWWISYLGFQKQEKLKEKVVSLEEELFEMK
NKQIEYRKDVESYFLTWVHQIKTPITASQLLLERNEPNVANQVRQEIVQIDNYTRLALSYLKLLNEASDMTITEVNIDDL
IKPLIMKYRIHFIEQHTKIHYQSNDDSILTDAQWTSILIEQILNNALKYARGKDIWIDFDSTSQQLSIKDNGIGISQADL
PKIFDKGYSGYNGSLNESSSGIGLFIVKHIAQHLNLNVEVTSDLNKGTQFTISFPTQS

Nucleotide


Download         Length: 897 bp        

>NTDB_id=1119320 EL068_RS01190 WP_047211220.1 267145..268041(+) (braS) [Staphylococcus warneri strain NCTC4133]
ATGTTACTAACGTTTATTAAATCAATTAAAAATGAAATAGCGATTGTTACGTTTATATCCTTACTGTTTGTACTCATTTT
CTTTGTGTTTTCACTCCCCCAAAGTGCGCTAATGCTTGGTGTAGCAATTATTTTATTTATTATGTGCATTTATTGGTGGA
TCAGTTATTTAGGTTTTCAAAAACAAGAAAAACTTAAAGAAAAAGTAGTATCACTCGAAGAAGAACTATTTGAAATGAAA
AACAAACAAATTGAATATCGTAAAGATGTTGAAAGTTATTTCTTAACATGGGTACATCAAATCAAAACGCCAATCACTGC
ATCGCAACTATTGCTAGAACGTAATGAACCTAATGTTGCCAATCAAGTGAGACAAGAAATTGTACAAATTGATAACTATA
CTCGTTTAGCACTAAGTTACTTAAAATTACTTAATGAAGCCTCGGATATGACAATCACAGAGGTGAACATAGATGATTTA
ATTAAACCTTTAATTATGAAATATCGAATTCACTTTATTGAACAACATACTAAAATTCATTATCAATCTAATGATGATAG
TATCTTAACAGATGCACAATGGACTTCAATATTGATAGAACAGATACTGAATAACGCATTAAAATATGCACGTGGAAAAG
ATATTTGGATTGACTTTGACTCAACGTCTCAACAATTATCTATTAAAGATAACGGGATTGGTATTAGTCAAGCAGACTTG
CCGAAAATCTTTGACAAAGGATATTCTGGTTACAATGGTAGCCTTAATGAATCCTCAAGCGGCATTGGATTGTTTATCGT
TAAACATATTGCGCAACATCTGAATTTAAATGTTGAAGTAACATCAGACTTGAATAAAGGTACACAATTTACAATTAGCT
TTCCAACGCAAAGCTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(198-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

61.356

98.993

0.607

Multiple sequence alignment