Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   EL020_RS03030 Genome accession   NZ_LR134203
Coordinates   602078..602860 (+) Length   260 a.a.
NCBI ID   WP_020917670.1    Uniprot ID   A0AB33AQ01
Organism   Streptococcus lutetiensis strain NCTC11436     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 597078..607860
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL020_RS03000 - 597877..599228 (+) 1352 WP_126402401.1 IS3 family transposase -
  EL020_RS03020 (NCTC11436_00631) rlmH 600066..600545 (-) 480 WP_020917668.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  EL020_RS03025 (NCTC11436_00632) htrA 600760..602010 (+) 1251 WP_020917669.1 S1C family serine protease Regulator
  EL020_RS03030 (NCTC11436_00633) spo0J 602078..602860 (+) 783 WP_020917670.1 ParB/RepB/Spo0J family partition protein Regulator
  EL020_RS03035 (NCTC11436_00634) dnaA 603064..604419 (+) 1356 WP_020915951.1 chromosomal replication initiator protein DnaA -
  EL020_RS03040 (NCTC11436_00635) dnaN 604578..605714 (+) 1137 WP_020915952.1 DNA polymerase III subunit beta -
  EL020_RS03045 - 605845..606635 (+) 791 Protein_615 diacylglycerol/lipid kinase family protein -
  EL020_RS03050 (NCTC11436_00639) - 606646..606837 (+) 192 WP_020915953.1 DUF951 domain-containing protein -

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29824.64 Da        Isoelectric Point: 9.6238

>NTDB_id=1118947 EL020_RS03030 WP_020917670.1 602078..602860(+) (spo0J) [Streptococcus lutetiensis strain NCTC11436]
MIETLNLIPIDDIAPNPYQPRLKFKPEELEELSRSIKANGLIQPIIVRKSDIFGYELIAGERRLKASKMAGLSEIPAIIK
DITNKESMQLAIVENLQRSDLNPIEEAKAYQQLLDKNQMTHEELAQFMGKSRPYITNCLRLLNLPTIISHAVEKGELSQG
HARVLLTLKDEKEQEKWYQKILNEDMSVRKLEQAVKSTKKKKTSSKVSKKDIFIRHQEEELSKLLGLPVTLSLSKSGFKG
DLQLHFQSEEDLNRIINRLK

Nucleotide


Download         Length: 783 bp        

>NTDB_id=1118947 EL020_RS03030 WP_020917670.1 602078..602860(+) (spo0J) [Streptococcus lutetiensis strain NCTC11436]
ATGATTGAAACACTTAATCTCATACCTATTGACGATATTGCACCAAATCCTTATCAACCTCGCTTGAAATTTAAACCAGA
AGAATTAGAAGAACTTTCTCGCTCAATAAAGGCAAACGGCCTCATACAGCCGATAATCGTCCGTAAATCAGATATTTTTG
GTTATGAGCTCATTGCAGGCGAAAGACGTCTTAAAGCATCAAAAATGGCTGGTTTAAGCGAAATTCCTGCAATTATAAAA
GATATTACTAATAAAGAAAGCATGCAGCTTGCTATTGTCGAAAATTTGCAGCGCTCTGACCTTAATCCTATTGAAGAAGC
CAAGGCTTATCAGCAATTGCTCGATAAAAATCAAATGACCCATGAAGAATTAGCACAATTTATGGGAAAATCTCGTCCTT
ATATTACGAATTGCTTGCGCTTATTGAATTTACCGACGATTATTTCTCATGCCGTCGAAAAAGGTGAACTTTCTCAAGGA
CATGCGCGTGTGCTGCTGACACTTAAGGACGAAAAAGAGCAGGAGAAGTGGTACCAAAAAATTCTGAACGAGGATATGAG
CGTTCGCAAACTCGAACAAGCTGTAAAATCTACTAAAAAGAAAAAAACATCTTCTAAAGTAAGCAAAAAAGATATTTTTA
TCCGTCATCAAGAAGAAGAATTATCAAAATTATTAGGTCTTCCTGTCACCTTATCACTTTCTAAAAGTGGCTTTAAAGGA
GACTTACAATTACATTTTCAATCAGAAGAAGACTTAAACAGAATTATCAACAGGCTAAAATAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(148-196)

ParB/Sulfiredoxin domain (ParB_N)

(8-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

61.538

100

0.615

Multiple sequence alignment