Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | EL064_RS12980 | Genome accession | NZ_LR134178 |
| Coordinates | 2999351..2999770 (+) | Length | 139 a.a. |
| NCBI ID | WP_128130162.1 | Uniprot ID | - |
| Organism | Legionella sainthelensi strain NCTC12450 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2994351..3004770
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL064_RS12970 (NCTC12450_02733) | - | 2995401..2995847 (+) | 447 | WP_164838713.1 | pilus assembly protein | - |
| EL064_RS12975 (NCTC12450_02734) | - | 2995860..2999339 (+) | 3480 | WP_128130161.1 | PilC/PilY family type IV pilus protein | - |
| EL064_RS12980 (NCTC12450_02735) | pilE | 2999351..2999770 (+) | 420 | WP_128130162.1 | type IV pilin protein | Machinery gene |
| EL064_RS12985 (NCTC12450_02736) | - | 2999876..3000499 (-) | 624 | WP_128130163.1 | hypothetical protein | - |
| EL064_RS18585 (NCTC12450_02737) | - | 3000712..3000903 (-) | 192 | WP_241969459.1 | hypothetical protein | - |
| EL064_RS18590 (NCTC12450_02738) | - | 3000872..3001105 (-) | 234 | WP_338418438.1 | extracellular solute-binding protein | - |
| EL064_RS12990 (NCTC12450_02739) | - | 3001032..3001739 (-) | 708 | WP_241969461.1 | spermidine/putrescine ABC transporter substrate-binding protein | - |
| EL064_RS12995 (NCTC12450_02740) | - | 3001736..3002503 (-) | 768 | WP_115701992.1 | ABC transporter permease subunit | - |
| EL064_RS13000 (NCTC12450_02741) | - | 3002500..3003324 (-) | 825 | WP_115701990.1 | ABC transporter permease subunit | - |
| EL064_RS13005 (NCTC12450_02742) | potA | 3003314..3004408 (-) | 1095 | WP_101901264.1 | spermidine/putrescine ABC transporter ATP-binding protein PotA | - |
Sequence
Protein
Download Length: 139 a.a. Molecular weight: 15135.31 Da Isoelectric Point: 8.0937
>NTDB_id=1118818 EL064_RS12980 WP_128130162.1 2999351..2999770(+) (pilE) [Legionella sainthelensi strain NCTC12450]
MKQPGRKGFTLIDLMIALVVMAILVTIAYPYYVSFLLKARRSDALATLAQDQIFLERCYAQNFSYNTCTSLPAFPQTSAQ
GFYSITLSNLGATTYTLTATPRGSQTEDTTCASMTVNQANVKTAVDSSGTAQTMCWNPS
MKQPGRKGFTLIDLMIALVVMAILVTIAYPYYVSFLLKARRSDALATLAQDQIFLERCYAQNFSYNTCTSLPAFPQTSAQ
GFYSITLSNLGATTYTLTATPRGSQTEDTTCASMTVNQANVKTAVDSSGTAQTMCWNPS
Nucleotide
Download Length: 420 bp
>NTDB_id=1118818 EL064_RS12980 WP_128130162.1 2999351..2999770(+) (pilE) [Legionella sainthelensi strain NCTC12450]
ATGAAACAACCTGGAAGAAAAGGGTTTACCTTAATTGATTTAATGATAGCTTTAGTCGTTATGGCAATACTGGTTACTAT
TGCCTACCCCTATTACGTGAGTTTTTTGCTAAAAGCACGACGTTCTGATGCTTTAGCGACACTAGCCCAAGATCAAATTT
TTCTTGAACGCTGCTATGCTCAAAATTTTTCTTATAATACATGCACATCTTTACCCGCCTTTCCACAAACATCAGCCCAA
GGATTCTACAGCATTACCTTAAGTAATCTGGGGGCAACAACATACACCCTTACTGCAACACCACGAGGAAGTCAGACCGA
AGATACAACGTGTGCGAGCATGACAGTAAATCAAGCCAACGTAAAAACTGCAGTAGATTCATCAGGAACTGCACAAACGA
TGTGTTGGAATCCATCATAG
ATGAAACAACCTGGAAGAAAAGGGTTTACCTTAATTGATTTAATGATAGCTTTAGTCGTTATGGCAATACTGGTTACTAT
TGCCTACCCCTATTACGTGAGTTTTTTGCTAAAAGCACGACGTTCTGATGCTTTAGCGACACTAGCCCAAGATCAAATTT
TTCTTGAACGCTGCTATGCTCAAAATTTTTCTTATAATACATGCACATCTTTACCCGCCTTTCCACAAACATCAGCCCAA
GGATTCTACAGCATTACCTTAAGTAATCTGGGGGCAACAACATACACCCTTACTGCAACACCACGAGGAAGTCAGACCGA
AGATACAACGTGTGCGAGCATGACAGTAAATCAAGCCAACGTAAAAACTGCAGTAGATTCATCAGGAACTGCACAAACGA
TGTGTTGGAATCCATCATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Legionella pneumophila str. Paris |
64.029 |
100 |
0.64 |
| pilE | Legionella pneumophila strain ERS1305867 |
64.029 |
100 |
0.64 |