Detailed information
Bioinformatically predicted
Overview
| Name | comB | Type | Machinery gene |
| Locus tag | ELZ62_RS03140 | Genome accession | NZ_LR134168 |
| Coordinates | 610614..611120 (+) | Length | 168 a.a. |
| NCBI ID | WP_011272049.1 | Uniprot ID | Q4QNA7 |
| Organism | Haemophilus influenzae strain NCTC11394 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 605614..616120
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ELZ62_RS03120 (NCTC11394_00616) | - | 605719..606048 (-) | 330 | WP_005629464.1 | YbaB/EbfC family nucleoid-associated protein | - |
| ELZ62_RS03125 (NCTC11394_00617) | - | 606201..607046 (-) | 846 | WP_015701650.1 | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | - |
| ELZ62_RS03130 (NCTC11394_00618) | - | 607123..609717 (-) | 2595 | WP_015701649.1 | penicillin-binding protein 1A | - |
| ELZ62_RS03135 (NCTC11394_00619) | comA | 609816..610613 (+) | 798 | WP_005693722.1 | competence protein A | Machinery gene |
| ELZ62_RS03140 (NCTC11394_00620) | comB | 610614..611120 (+) | 507 | WP_011272049.1 | competence protein ComB | Machinery gene |
| ELZ62_RS03145 (NCTC11394_00621) | comC | 611117..611638 (+) | 522 | WP_015701648.1 | competence protein ComC | Machinery gene |
| ELZ62_RS03150 (NCTC11394_00622) | comD | 611635..612048 (+) | 414 | WP_015701647.1 | pilus assembly protein PilP | Machinery gene |
| ELZ62_RS03155 (NCTC11394_00623) | comE | 612058..613395 (+) | 1338 | WP_015701646.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| ELZ62_RS03160 (NCTC11394_00624) | - | 613408..614094 (+) | 687 | WP_015701645.1 | ComF family protein | - |
| ELZ62_RS03165 (NCTC11394_00625) | nfuA | 614170..614766 (+) | 597 | WP_005649300.1 | Fe-S biogenesis protein NfuA | - |
| ELZ62_RS03170 (NCTC11394_00626) | nudC | 614833..615627 (+) | 795 | WP_015701644.1 | NAD(+) diphosphatase | - |
Sequence
Protein
Download Length: 168 a.a. Molecular weight: 19697.54 Da Isoelectric Point: 7.4684
>NTDB_id=1118675 ELZ62_RS03140 WP_011272049.1 610614..611120(+) (comB) [Haemophilus influenzae strain NCTC11394]
MSMNLLPWRTYQHQKRLRRLAFYIALFILLAINLMLAFSNLIEQQKQNLQAQQTSFEQLNQQLHKTTMQIDQLRSAVKVG
EVLTSIPNEQVKKSLQQLSELPFQQGELNKFKQDANNLSLEGNAQDQTEFELIHQFLKKHFPNVKLSQVQPEQDTLFFHF
DVEQGAEK
MSMNLLPWRTYQHQKRLRRLAFYIALFILLAINLMLAFSNLIEQQKQNLQAQQTSFEQLNQQLHKTTMQIDQLRSAVKVG
EVLTSIPNEQVKKSLQQLSELPFQQGELNKFKQDANNLSLEGNAQDQTEFELIHQFLKKHFPNVKLSQVQPEQDTLFFHF
DVEQGAEK
Nucleotide
Download Length: 507 bp
>NTDB_id=1118675 ELZ62_RS03140 WP_011272049.1 610614..611120(+) (comB) [Haemophilus influenzae strain NCTC11394]
ATGTCGATGAATTTATTGCCTTGGCGTACTTATCAACATCAAAAGCGTTTACGTCGTTTAGCTTTTTATATCGCTTTATT
TATCTTGCTTGCTATTAATTTAATGTTGGCTTTTAGCAATTTGATTGAACAACAGAAACAAAATTTGCAAGCGCAGCAAA
CATCTTTTGAACAACTTAATCAGCAACTTCACAAAACTACCATGCAAATTGATCAGTTACGCAGTGCGGTGAAAGTTGGT
GAAGTTTTGACATCTATTCCCAACGAGCAAGTAAAAAAGAGTTTACAACAGCTAAGTGAATTACCTTTTCAACAAGGAGA
ACTGAATAAATTTAAACAAGATGCCAATAACTTAAGCTTGGAAGGTAACGCACAAGATCAAACAGAATTTGAACTGATTC
ATCAATTTTTAAAGAAACATTTTCCCAATGTGAAATTAAGTCAGGTTCAACCTGAACAAGATACATTGTTTTTTCACTTT
GATGTGGAACAAGGGGCGGAAAAATGA
ATGTCGATGAATTTATTGCCTTGGCGTACTTATCAACATCAAAAGCGTTTACGTCGTTTAGCTTTTTATATCGCTTTATT
TATCTTGCTTGCTATTAATTTAATGTTGGCTTTTAGCAATTTGATTGAACAACAGAAACAAAATTTGCAAGCGCAGCAAA
CATCTTTTGAACAACTTAATCAGCAACTTCACAAAACTACCATGCAAATTGATCAGTTACGCAGTGCGGTGAAAGTTGGT
GAAGTTTTGACATCTATTCCCAACGAGCAAGTAAAAAAGAGTTTACAACAGCTAAGTGAATTACCTTTTCAACAAGGAGA
ACTGAATAAATTTAAACAAGATGCCAATAACTTAAGCTTGGAAGGTAACGCACAAGATCAAACAGAATTTGAACTGATTC
ATCAATTTTTAAAGAAACATTTTCCCAATGTGAAATTAAGTCAGGTTCAACCTGAACAAGATACATTGTTTTTTCACTTT
GATGTGGAACAAGGGGCGGAAAAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB | Haemophilus influenzae 86-028NP |
100 |
100 |
1 |
| comB | Haemophilus influenzae Rd KW20 |
98.81 |
100 |
0.988 |