Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   EL050_RS17520 Genome accession   NZ_LR134165
Coordinates   3457079..3459394 (-) Length   771 a.a.
NCBI ID   WP_126430465.1    Uniprot ID   -
Organism   Bacillus paralicheniformis strain NCTC8721     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3452079..3464394
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL050_RS17480 (NCTC8721_03607) - 3452544..3452975 (+) 432 WP_003184834.1 Na(+)/H(+) antiporter subunit B -
  EL050_RS17485 (NCTC8721_03608) - 3452975..3453316 (+) 342 WP_020452785.1 Na(+)/H(+) antiporter subunit C -
  EL050_RS17490 (NCTC8721_03609) - 3453309..3454787 (+) 1479 WP_025809735.1 Na+/H+ antiporter subunit D -
  EL050_RS17495 (NCTC8721_03610) - 3454793..3455269 (+) 477 WP_020452787.1 Na+/H+ antiporter subunit E -
  EL050_RS17500 (NCTC8721_03611) - 3455269..3455553 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  EL050_RS17505 (NCTC8721_03612) mnhG 3455537..3455911 (+) 375 WP_023856153.1 monovalent cation/H(+) antiporter subunit G -
  EL050_RS17510 (NCTC8721_03613) - 3455948..3456337 (-) 390 WP_009329508.1 hotdog fold thioesterase -
  EL050_RS17515 (NCTC8721_03614) comA 3456354..3456992 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  EL050_RS17520 (NCTC8721_03615) comP 3457079..3459394 (-) 2316 WP_126430465.1 ATP-binding protein Regulator
  EL050_RS17525 (NCTC8721_03616) comX 3459415..3459585 (-) 171 WP_020452790.1 competence pheromone ComX -
  EL050_RS17530 (NCTC8721_03617) - 3459557..3460468 (-) 912 WP_020452791.1 polyprenyl synthetase family protein -
  EL050_RS17535 (NCTC8721_03618) degQ 3460655..3460795 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  EL050_RS17545 (NCTC8721_03619) - 3461407..3461628 (+) 222 WP_230368259.1 hypothetical protein -
  EL050_RS17550 (NCTC8721_03620) - 3461671..3462891 (-) 1221 WP_020452793.1 HDOD domain-containing protein -

Sequence


Protein


Download         Length: 771 a.a.        Molecular weight: 89244.04 Da        Isoelectric Point: 7.2313

>NTDB_id=1118615 EL050_RS17520 WP_126430465.1 3457079..3459394(-) (comP) [Bacillus paralicheniformis strain NCTC8721]
MKSYYNKVSLVLILLSFIYVLYVCYLSFNNNLVGLKVKNLDEYSLEVVEVKKHTLAADYAELKEGDIIHRINGQQVPFKK
DKEYTLSNVLTLTIERNGKVFENDSLIYLDLVSYDSFFIFIIPLIFYFLCLICVYFIFKVNKSKNLFSAFLLVLFLLITS
IAYVSAGAVARGDTFSRFVNILTFLAVPTSYLHFIYRYFKEIGKTFFSNKVFLLYLIPFINLILEAGLYLFEFEGSILKS
INLLSFFISTVIVFILITYALIKFKYSQQSYLLKILMLMNFIALVPFLFFYVLPMLVFGDYIFSAIVVSPFLLLIPLSLV
YQFMSNKIYDIEFLIGRLKYYSFLAIIPTSLIITILAIVKHQEGEFFTVQVTIFTYLIMVGVFYLKEIIDFRFRLKRFSE
KFNYQDSIFKFTQTIRTFTSLNQVLMELKQIVLDVLLVNNIYMLKVKNDGSVSMLENDAEEKPWIPYEQEVTKVITDIGK
IVEVDRGFLIKIGERGGTSYVMLCLSVLNTPRLTRDEISWLETLAFYTSVSLENVLKIGELMDHLEHVKKEGPNPARLNK
LMFAIEEKQRSDLARDLHDSVLQDMISLKHQSEMFLADFEKDKVCTNQIRQRLINMNEQMSTVIQTTRETCQELRPQLLY
DLGLVKALSKLAAQHQESSSIDKIRLNTERFSKVLDLDTQLNLYRIVQELLSNAVKHSKANEVLIMLVCIKEKVVLHYED
DGIGFDPDKLYQNSASMGLSGIRERVRALNGSLDIQTAEGKGFRVAIEMEL

Nucleotide


Download         Length: 2316 bp        

>NTDB_id=1118615 EL050_RS17520 WP_126430465.1 3457079..3459394(-) (comP) [Bacillus paralicheniformis strain NCTC8721]
ATGAAGTCATATTATAACAAGGTTTCACTAGTTCTCATATTGTTAAGTTTTATTTATGTTCTCTATGTTTGCTATCTTAG
TTTTAATAATAATCTAGTTGGGTTAAAGGTGAAAAATCTTGATGAATACAGTCTTGAAGTTGTGGAAGTGAAAAAACACA
CTTTAGCCGCTGATTATGCAGAATTAAAAGAAGGAGATATCATTCATAGAATAAATGGGCAGCAGGTTCCATTTAAAAAA
GATAAGGAATATACATTGTCAAACGTTTTAACGTTAACAATTGAAAGAAATGGGAAAGTATTTGAGAATGATTCTCTGAT
ATATTTGGATTTAGTCAGTTATGACAGTTTTTTTATATTTATCATTCCGTTGATCTTTTACTTTTTATGTTTAATTTGTG
TGTATTTTATTTTTAAAGTAAACAAATCTAAAAATCTTTTCTCAGCATTTTTATTAGTCCTATTTCTGCTTATTACTTCT
ATAGCTTATGTTAGTGCAGGCGCAGTTGCAAGAGGTGACACTTTCAGTAGATTTGTAAATATACTTACTTTTTTAGCTGT
TCCAACTAGCTACTTACATTTTATTTATCGATACTTTAAAGAGATAGGGAAAACATTTTTCAGTAATAAAGTTTTTTTAC
TTTATTTAATACCATTTATAAACCTCATACTTGAAGCTGGTTTATACTTATTTGAATTTGAGGGAAGTATTCTAAAAAGT
ATTAACTTATTGTCGTTCTTTATTTCGACGGTTATTGTTTTTATTCTGATTACATATGCCTTAATTAAATTCAAGTATTC
TCAACAGTCCTACTTATTGAAAATATTAATGTTGATGAACTTCATTGCATTGGTACCTTTTTTGTTTTTCTATGTACTTC
CTATGCTGGTCTTTGGCGATTATATTTTCTCGGCCATTGTTGTGTCCCCGTTTCTGTTGCTGATTCCTTTATCTTTGGTA
TATCAATTTATGTCTAATAAAATATATGATATTGAATTTTTAATTGGTCGATTGAAATATTATAGTTTTTTAGCGATAAT
TCCAACTTCTTTAATTATTACTATTTTAGCCATTGTTAAGCATCAAGAAGGAGAATTTTTCACAGTACAGGTTACAATCT
TTACATATCTTATCATGGTAGGCGTTTTCTATTTAAAAGAAATTATTGATTTTCGCTTTCGGCTAAAGCGCTTTTCAGAA
AAATTTAACTACCAGGATAGTATTTTTAAATTTACTCAAACCATTCGAACATTTACGTCTTTAAATCAAGTTTTAATGGA
GTTAAAACAAATCGTTTTGGACGTGCTTCTTGTTAATAATATTTATATGCTCAAAGTAAAAAACGATGGATCGGTATCGA
TGCTAGAGAATGATGCAGAAGAAAAACCGTGGATCCCGTACGAACAAGAAGTAACCAAGGTCATCACCGACATCGGTAAA
ATCGTCGAAGTCGACCGCGGATTTTTGATTAAGATCGGTGAACGGGGCGGGACTTCTTATGTCATGCTGTGTTTGTCGGT
TTTAAATACGCCTAGGCTGACGCGCGATGAGATTTCGTGGCTTGAGACGCTGGCGTTTTATACGAGTGTTTCCCTGGAGA
ACGTCTTGAAAATCGGCGAGCTGATGGACCATCTGGAACATGTGAAAAAAGAAGGGCCGAATCCAGCGCGGCTGAATAAA
TTGATGTTTGCGATTGAAGAGAAGCAGAGATCTGATTTGGCCCGTGATCTTCATGATTCTGTGCTGCAGGACATGATTTC
CTTGAAGCATCAAAGCGAGATGTTTCTGGCTGATTTTGAAAAAGATAAAGTCTGTACGAATCAAATCAGGCAAAGGCTCA
TCAATATGAATGAGCAAATGTCCACCGTCATCCAGACGACAAGGGAAACGTGTCAGGAGCTGAGGCCGCAGCTGTTGTAC
GATCTTGGACTGGTCAAAGCCCTTTCGAAACTGGCGGCACAGCATCAGGAGTCCTCATCGATCGATAAGATCCGCCTCAA
TACGGAAAGGTTCTCAAAGGTGCTCGACCTGGACACGCAGTTGAATTTGTACAGAATTGTGCAGGAGCTTTTAAGCAATG
CGGTTAAACACTCGAAAGCTAATGAGGTTTTGATTATGCTTGTCTGCATAAAAGAAAAAGTTGTTCTTCATTATGAAGAT
GACGGCATCGGTTTTGATCCGGACAAGCTTTATCAAAACAGCGCAAGCATGGGGCTGTCGGGTATTCGCGAGCGAGTCCG
CGCGCTGAACGGCAGTCTGGATATACAGACAGCAGAAGGGAAAGGCTTCAGGGTCGCCATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

53.161

100

0.534


Multiple sequence alignment