Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   ELZ55_RS08095 Genome accession   NZ_LR134139
Coordinates   1607959..1608645 (-) Length   228 a.a.
NCBI ID   WP_072353822.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NCTC4163     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1602959..1613645
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ55_RS08075 (NCTC4163_01522) rpsT 1603873..1604124 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  ELZ55_RS08080 (NCTC4163_01523) holA 1604169..1605143 (-) 975 WP_001282562.1 DNA polymerase III subunit delta -
  ELZ55_RS08085 (NCTC4163_01524) comEC 1605200..1607401 (-) 2202 WP_001815444.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ELZ55_RS08090 (NCTC4163_01525) - 1607406..1607867 (-) 462 WP_000439693.1 ComE operon protein 2 -
  ELZ55_RS08095 (NCTC4163_01526) comEA 1607959..1608645 (-) 687 WP_072353822.1 ComEA family DNA-binding protein Machinery gene
  ELZ55_RS08100 (NCTC4163_01527) - 1608685..1609401 (-) 717 WP_000084829.1 class I SAM-dependent DNA methyltransferase -
  ELZ55_RS08105 (NCTC4163_01528) rsfS 1609404..1609757 (-) 354 WP_042727695.1 ribosome silencing factor -
  ELZ55_RS08110 (NCTC4163_01529) yqeK 1609758..1610342 (-) 585 WP_001019320.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  ELZ55_RS08115 (NCTC4163_01530) nadD 1610332..1610901 (-) 570 WP_000725162.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  ELZ55_RS08120 (NCTC4163_01531) yhbY 1610904..1611194 (-) 291 WP_000955231.1 ribosome assembly RNA-binding protein YhbY -
  ELZ55_RS08125 (NCTC4163_01532) aroE 1611198..1612004 (-) 807 WP_000666748.1 shikimate dehydrogenase -
  ELZ55_RS08130 (NCTC4163_01533) yqeH 1612018..1613118 (-) 1101 WP_001280136.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25773.50 Da        Isoelectric Point: 9.6753

>NTDB_id=1118445 ELZ55_RS08095 WP_072353822.1 1607959..1608645(-) (comEA) [Staphylococcus aureus strain NCTC4163]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKVEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIGVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTI

Nucleotide


Download         Length: 687 bp        

>NTDB_id=1118445 ELZ55_RS08095 WP_072353822.1 1607959..1608645(-) (comEA) [Staphylococcus aureus strain NCTC4163]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAAGTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAGGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGAGGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGGAGTAAACAGTGTGCATGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACCGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGATATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

99.561

100

0.996
  comEA Staphylococcus aureus N315

97.807

100

0.978

Multiple sequence alignment