Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   ELZ51_RS11195 Genome accession   NZ_LR134094
Coordinates   58193..58288 (+) Length   31 a.a.
NCBI ID   WP_198455558.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 53193..63288
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ51_RS00355 (NCTC4669_00072) purE 54191..54679 (+) 489 WP_003049074.1 5-(carboxyamino)imidazole ribonucleotide mutase -
  ELZ51_RS00360 (NCTC4669_00073) purK 54666..55751 (+) 1086 WP_126425589.1 5-(carboxyamino)imidazole ribonucleotide synthase -
  ELZ51_RS00365 (NCTC4669_00074) purB 55761..57053 (+) 1293 WP_126425591.1 adenylosuccinate lyase -
  ELZ51_RS00370 (NCTC4669_00075) comR 57195..58106 (+) 912 WP_126425593.1 helix-turn-helix domain-containing protein Regulator
  ELZ51_RS11195 (NCTC4669_00076) comS 58193..58288 (+) 96 WP_198455558.1 quorum-sensing system DWW-type pheromone Regulator
  ELZ51_RS00375 (NCTC4669_00077) ruvB 58339..59337 (+) 999 WP_003049085.1 Holliday junction branch migration DNA helicase RuvB -
  ELZ51_RS00380 (NCTC4669_00078) - 59472..59903 (+) 432 WP_003049087.1 low molecular weight protein-tyrosine-phosphatase -
  ELZ51_RS00385 (NCTC4669_00079) - 59932..60333 (+) 402 WP_003049089.1 MORN repeat-containing protein -
  ELZ51_RS00390 (NCTC4669_00080) - 60330..62105 (+) 1776 WP_003049091.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 31 a.a.        Molecular weight: 3929.72 Da        Isoelectric Point: 10.1669

>NTDB_id=1118309 ELZ51_RS11195 WP_198455558.1 58193..58288(+) (comS) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
MFKRYHYYFILTAMLAFKAAQMISQVDWWRL

Nucleotide


Download         Length: 96 bp        

>NTDB_id=1118309 ELZ51_RS11195 WP_198455558.1 58193..58288(+) (comS) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
ATGTTCAAAAGATATCACTACTATTTTATACTTACTGCTATGTTGGCATTTAAAGCAGCTCAGATGATAAGTCAAGTGGA
TTGGTGGCGTTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS8232

61.29

100

0.613
  comS Streptococcus pyogenes MGAS315

38.71

100

0.387

Multiple sequence alignment