Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   ELZ51_RS07205 Genome accession   NZ_LR134094
Coordinates   1418266..1420068 (-) Length   600 a.a.
NCBI ID   WP_126426854.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1413266..1425068
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ51_RS07180 (NCTC4669_01529) - 1413936..1414643 (-) 708 WP_115252976.1 O-methyltransferase -
  ELZ51_RS07185 (NCTC4669_01530) - 1414695..1415906 (-) 1212 WP_126426852.1 OFA family MFS transporter -
  ELZ51_RS07190 (NCTC4669_01531) - 1416239..1416859 (-) 621 WP_115246187.1 HAD-IA family hydrolase -
  ELZ51_RS07195 (NCTC4669_01532) - 1416859..1417401 (-) 543 WP_003051521.1 GNAT family N-acetyltransferase -
  ELZ51_RS07200 (NCTC4669_01533) - 1417524..1418078 (-) 555 WP_115246189.1 NADPH-dependent FMN reductase -
  ELZ51_RS07205 (NCTC4669_01534) pepF 1418266..1420068 (-) 1803 WP_126426854.1 oligoendopeptidase F Regulator
  ELZ51_RS07210 (NCTC4669_01535) - 1420079..1421041 (-) 963 WP_126426856.1 competence protein CoiA -
  ELZ51_RS07225 (NCTC4669_01538) - 1422488..1423647 (-) 1160 Protein_1389 MFS transporter -
  ELZ51_RS07230 (NCTC4669_01540) - 1423739..1424455 (-) 717 WP_126426860.1 pseudouridine synthase -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 69236.14 Da        Isoelectric Point: 4.7410

>NTDB_id=1118286 ELZ51_RS07205 WP_126426854.1 1418266..1420068(-) (pepF) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
MTDNRSHLEEKYTWDLSTIFATDKDWEAEVSGLASEIDTAKDFAGHLLDSSANLLTITDTYLELARRVEKVYVYAHMKND
QDTTVAKYQEYQAKASGLYAKFSEVFSFYDPEVMALSQEDYQAFLVETPELKRYHHFFDKLFQTRDHVLSQAEEELLAGA
QEIFNGAEETFSILDNADIVFPVVKNDKGEDVELTHGNFISLMESKNRSVRKAAYEAMYSTYEQFQHTYAKILQTNVKVQ
NYKARVHKYDSARQAAMAANFIPEAVYDTLLETVNKHLPLLHRYLKLRQDVLGLDELKMYDVYTPLSETDLAIGYDEALE
KAEKVLAVFGKDYADRVHRAFTERWIDVHVNKGKRSGAYSGGSYDTNAFMLLNWQDTLDNLYTLVHETGHSLHSTFTRET
QPYVYGDYSIFLAEIASTTNENIMTEALLNEVQDEKERFAILNHYLDGFRGTVFRQTQFAEFEHAIHQADQKGEVLTSEY
LNQLYAELNEKYYGLSKDDNHFIQYEWARIPHFYYNYYVYQYATGFAAASYLADKIVHGTQDDIDHYLTYLKSGNSDYPL
EVIAKAGVDMAKGDYLDAAFKVFEERLTELEALVAKGVHR

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=1118286 ELZ51_RS07205 WP_126426854.1 1418266..1420068(-) (pepF) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
ATGACAGATAATCGTAGTCATTTAGAAGAAAAGTACACTTGGGATTTGAGCACTATTTTTGCAACAGATAAGGATTGGGA
AGCTGAAGTGAGTGGCTTAGCTAGTGAAATTGACACGGCTAAGGATTTTGCAGGTCATTTACTAGATTCTAGCGCTAATC
TGTTGACAATTACAGATACTTATTTAGAGTTGGCTCGTCGTGTTGAGAAAGTCTATGTTTATGCGCATATGAAAAATGAT
CAAGACACGACTGTTGCTAAATATCAAGAATATCAGGCTAAGGCTTCTGGCTTGTATGCTAAATTTAGCGAAGTGTTTTC
ATTCTATGACCCAGAAGTTATGGCATTGAGTCAGGAAGATTACCAAGCTTTTCTTGTGGAAACTCCTGAGTTAAAAAGAT
ATCATCATTTCTTTGACAAATTGTTCCAGACACGTGACCATGTGCTTAGTCAGGCTGAAGAGGAATTATTAGCAGGAGCC
CAAGAAATTTTCAACGGCGCTGAAGAAACCTTTAGCATTCTGGATAACGCTGATATTGTCTTTCCAGTAGTTAAAAATGA
TAAGGGGGAAGATGTTGAATTAACCCATGGTAACTTCATCAGTTTAATGGAATCTAAAAATCGTAGCGTTCGCAAAGCTG
CTTACGAGGCAATGTATAGCACTTATGAACAGTTCCAACACACTTATGCTAAAATCTTACAAACAAATGTTAAGGTTCAA
AATTACAAGGCGCGTGTTCATAAATACGATTCAGCACGTCAAGCTGCTATGGCTGCTAACTTTATTCCAGAAGCTGTTTA
CGACACTTTATTAGAAACAGTTAACAAACATTTACCACTTTTACACCGTTACTTGAAACTTCGCCAAGATGTTCTTGGTC
TAGATGAGTTGAAGATGTATGATGTTTACACACCATTATCTGAAACAGACCTAGCCATTGGTTATGATGAGGCTTTGGAA
AAAGCTGAGAAGGTTTTGGCTGTTTTTGGTAAGGATTATGCAGACCGAGTGCATCGTGCCTTTACAGAACGTTGGATTGA
TGTTCATGTCAATAAAGGGAAGCGCTCTGGAGCTTATTCAGGTGGTTCCTACGATACCAATGCCTTTATGCTATTAAACT
GGCAAGATACCTTAGACAATCTATACACTTTAGTTCATGAAACTGGGCACAGTTTGCATTCTACTTTCACTCGTGAAACA
CAGCCTTATGTGTATGGAGATTACAGTATTTTCTTGGCAGAAATTGCATCTACAACTAATGAAAACATCATGACAGAAGC
TCTCTTAAATGAGGTTCAAGATGAGAAAGAACGCTTTGCTATTTTAAACCATTACCTTGACGGTTTCCGTGGCACTGTTT
TCCGTCAAACCCAATTTGCTGAGTTTGAACACGCGATCCATCAAGCTGATCAAAAAGGAGAAGTGTTAACGAGCGAATAC
CTCAACCAATTGTATGCTGAGTTGAATGAAAAGTATTATGGGTTGAGTAAAGACGATAATCATTTTATTCAGTATGAATG
GGCACGTATTCCTCACTTCTATTACAATTATTATGTTTATCAGTATGCTACAGGCTTTGCAGCAGCAAGTTATTTAGCCG
ATAAGATTGTTCACGGAACGCAAGACGATATTGATCATTACTTGACCTACCTCAAGTCAGGAAATTCTGACTACCCACTT
GAGGTCATCGCTAAAGCGGGTGTTGATATGGCAAAAGGTGACTATCTTGACGCAGCCTTTAAAGTCTTCGAAGAACGTCT
AACAGAACTTGAAGCCCTTGTTGCAAAGGGAGTTCATCGCTAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(202-580)

Oligopeptidase F (Peptidase_M3_N)

(112-181)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

71.953

99.833

0.718

Multiple sequence alignment