Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   ELZ49_RS08335 Genome accession   NZ_LR134086
Coordinates   1676168..1676854 (-) Length   228 a.a.
NCBI ID   WP_075583650.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NCTC13142     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1671168..1681854
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ49_RS08315 (NCTC13142_01610) rpsT 1672082..1672333 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  ELZ49_RS08320 (NCTC13142_01611) holA 1672378..1673352 (-) 975 WP_001282562.1 DNA polymerase III subunit delta -
  ELZ49_RS08325 (NCTC13142_01612) comEC 1673409..1675610 (-) 2202 WP_001670363.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ELZ49_RS08330 (NCTC13142_01613) - 1675615..1676076 (-) 462 WP_000439693.1 ComE operon protein 2 -
  ELZ49_RS08335 (NCTC13142_01614) comEA 1676168..1676854 (-) 687 WP_075583650.1 ComEA family DNA-binding protein Machinery gene
  ELZ49_RS08340 (NCTC13142_01615) - 1676894..1677610 (-) 717 WP_000084824.1 class I SAM-dependent DNA methyltransferase -
  ELZ49_RS08345 (NCTC13142_01616) rsfS 1677613..1677966 (-) 354 WP_001088022.1 ribosome silencing factor -
  ELZ49_RS08350 (NCTC13142_01617) yqeK 1677967..1678551 (-) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  ELZ49_RS08355 (NCTC13142_01618) nadD 1678541..1679110 (-) 570 WP_000725167.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  ELZ49_RS08360 (NCTC13142_01619) yhbY 1679113..1679403 (-) 291 WP_000955235.1 ribosome assembly RNA-binding protein YhbY -
  ELZ49_RS08365 (NCTC13142_01620) aroE 1679407..1680213 (-) 807 WP_000666749.1 shikimate dehydrogenase -
  ELZ49_RS08370 (NCTC13142_01621) yqeH 1680227..1681327 (-) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25787.53 Da        Isoelectric Point: 9.6753

>NTDB_id=1118007 ELZ49_RS08335 WP_075583650.1 1676168..1676854(-) (comEA) [Staphylococcus aureus strain NCTC13142]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKLEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIGVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTI

Nucleotide


Download         Length: 687 bp        

>NTDB_id=1118007 ELZ49_RS08335 WP_075583650.1 1676168..1676854(-) (comEA) [Staphylococcus aureus strain NCTC13142]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAGTGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGAGGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGGAGTAAACAGTGTGCATGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACCGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGATATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

99.123

100

0.991
  comEA Staphylococcus aureus N315

98.246

100

0.982

Multiple sequence alignment