Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   EW032_RS04800 Genome accession   NZ_LR130509
Coordinates   948883..949869 (+) Length   328 a.a.
NCBI ID   WP_000959293.1    Uniprot ID   A0A641A950
Organism   Staphylococcus aureus strain BPH2760 isolate BPH2760     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 943883..954869
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EW032_RS04775 opp4B 944096..945058 (+) 963 WP_000239820.1 oligopeptide ABC transporter permease -
  EW032_RS04780 opp4C 945070..945951 (+) 882 WP_001180274.1 oligopeptide ABC transporter permease -
  EW032_RS04785 trpS 945993..946982 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  EW032_RS04790 spxA 947277..947672 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  EW032_RS04795 mecA 948043..948762 (+) 720 WP_001217728.1 adaptor protein MecA -
  EW032_RS04800 coiA 948883..949869 (+) 987 WP_000959293.1 competence protein CoiA Machinery gene
  EW032_RS04805 pepF 949917..951725 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  EW032_RS04810 yjbH 952185..952991 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  EW032_RS04815 - 953014..953379 (-) 366 WP_000214070.1 truncated hemoglobin YjbI -
  EW032_RS04820 - 953483..954076 (-) 594 WP_000224612.1 CYTH domain-containing protein -
  EW032_RS04825 - 954262..954609 (+) 348 WP_001242102.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38898.54 Da        Isoelectric Point: 9.7732

>NTDB_id=1116768 EW032_RS04800 WP_000959293.1 948883..949869(+) (coiA) [Staphylococcus aureus strain BPH2760 isolate BPH2760]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGFKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPFTRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIKNHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVGLESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=1116768 EW032_RS04800 WP_000959293.1 948883..949869(+) (coiA) [Staphylococcus aureus strain BPH2760 isolate BPH2760]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATTTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCATTCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGAAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTAAAAATCATCCTATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGGTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-306)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A641A950

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus MW2

100

100

1
  coiA Staphylococcus aureus N315

97.561

100

0.976

Multiple sequence alignment