Detailed information NTG1116412

Bioinformatically predicted

Overview

• Name: pptA
• Type: Regulator
• Locus tag: EQB47_RS02685
• Genome accession: NZ_LR129844
• Coordinates: 486662..487393 (+)
• Length: 243 a.a.
• NCBI ID: WP_000889923.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 180-15 isolate 180-15
• Function: export ComS (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	485887..495431	486662..487393	within	0

Gene organization within MGE regions

Location: 485887..495431

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQB47_RS02675	-	485887..486174 (-)	288	WP_000777760.1	hypothetical protein	-
EQB47_RS02680	-	486184..486594 (-)	411	WP_001278301.1	HIT family protein	-
EQB47_RS02685	pptA	486662..487393 (+)	732	WP_000889923.1	ABC transporter ATP-binding protein	Regulator
EQB47_RS02690	-	487390..488439 (+)	1050	WP_000653752.1	ABC transporter permease	-
EQB47_RS02695	-	488607..488936 (-)	330	WP_000132570.1	hypothetical protein	-
EQB47_RS02700	-	489212..489550 (+)	339	WP_000682119.1	LytTR family DNA-binding domain-containing protein	-
EQB47_RS02705	comE/blpR	489555..490292 (+)	738	WP_001219127.1	response regulator transcription factor	Regulator
EQB47_RS02710	-	490306..491646 (+)	1341	WP_001017622.1	sensor histidine kinase	-
EQB47_RS02715	blpC	491688..491843 (-)	156	WP_000358813.1	quorum-sensing system pheromone BlpC	-
EQB47_RS02720	-	491900..493261 (-)	1362	WP_001069092.1	bacteriocin secretion accessory protein	-
EQB47_RS11975	comA/nlmT	493272..493760 (-)	489	WP_307774349.1	ATP-binding cassette domain-containing protein	Regulator
EQB47_RS11980	comA/nlmT	493744..494184 (-)	441	WP_001808911.1	ATP-binding cassette domain-containing protein	Regulator
EQB47_RS11985	comA/nlmT	494174..494899 (-)	726	WP_167750760.1	ABC transporter transmembrane domain-containing protein	Regulator
EQB47_RS11990	comA/nlmT	494844..495431 (-)	588	WP_000205166.1	cysteine peptidase family C39 domain-containing protein	Regulator

Sequence

Protein

• Length: 243 a.a.
• Molecular weight: 27026.52 Da
• Isoelectric Point: 4.7792

>NTDB_id=1116412 EQB47_RS02685 WP_000889923.1 486662..487393(+) (pptA) [Streptococcus pneumoniae strain 180-15 isolate 180-15]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLAPYSGSININGLTLQGDATSYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQKVAFERVEPLLKMFRLEQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAISDLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAKGNLLQLREAFDMPEASLNDIYLALTKE
EDL

Nucleotide

• Length: 732 bp

>NTDB_id=1116412 EQB47_RS02685 WP_000889923.1 486662..487393(+) (pptA) [Streptococcus pneumoniae strain 180-15 isolate 180-15]
ATGTTAGAAATTAAAAACCTGACAGGTGGCTATGTTCATGTTCCTGTTTTGAAAGATGTGTCCTTTACTGTTGAAAGTGG
GCAGTTGGTCGGTTTGATTGGTCTCAATGGTGCTGGGAAATCAACGACGATCAATGAGATTATCGGTCTGTTGGCACCTT
ATAGTGGCTCCATCAATATCAATGGCCTGACTCTGCAAGGAGATGCGACTAGCTACCGCAAGCAGATTGGCTACATTCCT
GAGACGCCTAGTCTGTATGAGGAATTGACCCTCAGAGAGCATATCGAAACGGTTGCTATGGCTTACGGTATTGAGCAAAA
AGTGGCTTTCGAACGAGTAGAGCCCTTGTTAAAAATGTTCCGTTTGGAACAGAAATTAGACTGGTTCCCTGTTCATTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCTTTTGTGGTGGATCCAAGTCTTTTCATCGTGGATGAGCCTTTC
CTTGGTCTTGATCCGCTGGCTATTTCTGATTTGATTCAGCTTTTGGAAGTGGAGAAGCAAAAGGGCAAGTCTATTCTCAT
GAGTACCCACGTGCTGGATTCGGCGGAAAAGATGTGTGATGCCTTTGTCATTCTTCACAAGGGAGAGGTGCGTGCCAAAG
GCAATCTCCTGCAACTACGTGAAGCCTTTGATATGCCTGAGGCTAGTTTGAATGATATTTACTTGGCTCTGACCAAAGAG
GAGGATCTATGA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (17-160)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pptA	Streptococcus salivarius strain HSISS4	72.199	99.177	0.716
pptA	Streptococcus thermophilus LMD-9	71.369	99.177	0.708