Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   E0E14_RS10585 Genome accession   NZ_LR027877
Coordinates   2044889..2045932 (-) Length   347 a.a.
NCBI ID   WP_130828154.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate BPH3244     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2039889..2050932
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E0E14_RS10555 - 2040307..2041563 (-) 1257 WP_001795438.1 aminopeptidase -
  E0E14_RS10560 - 2041566..2041766 (-) 201 WP_000180461.1 DUF1128 family protein -
  E0E14_RS10565 - 2041913..2042377 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  E0E14_RS10570 - 2042384..2042659 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  E0E14_RS10575 - 2042937..2044154 (+) 1218 WP_000037075.1 YihY/virulence factor BrkB family protein -
  E0E14_RS10580 vraR 2044270..2044899 (-) 630 WP_000153530.1 two-component system response regulator VraR Regulator
  E0E14_RS10585 vraS 2044889..2045932 (-) 1044 WP_130828154.1 sensor histidine kinase Regulator
  E0E14_RS10590 liaF 2045929..2046630 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  E0E14_RS10595 - 2046645..2047031 (-) 387 WP_001110179.1 hypothetical protein -
  E0E14_RS10600 map 2047248..2048006 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  E0E14_RS10610 - 2048593..2049579 (+) 987 WP_000999713.1 FUSC family protein -
  E0E14_RS10620 - 2050010..2050423 (-) 414 WP_001549145.1 hypothetical protein -
  E0E14_RS10625 - 2050452..2050562 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40030.49 Da        Isoelectric Point: 6.0577

>NTDB_id=1116017 E0E14_RS10585 WP_130828154.1 2044889..2045932(-) (vraS) [Staphylococcus aureus isolate BPH3244]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIVILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=1116017 E0E14_RS10585 WP_130828154.1 2044889..2045932(-) (vraS) [Staphylococcus aureus isolate BPH3244]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTTTTTTTATTTTTAAATC
TCATCGTCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
TATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGATAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

99.712

100

0.997


Multiple sequence alignment