Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | HAS68_RS00825 | Genome accession | NZ_CP002007 |
| Coordinates | 127166..128119 (+) | Length | 317 a.a. |
| NCBI ID | WP_024409299.1 | Uniprot ID | A0A7Y6VE95 |
| Organism | Streptococcus suis 05HAS68 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 122166..133119
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HAS68_RS00785 (HAS68_0111) | - | 122429..123379 (-) | 951 | WP_002936565.1 | S66 peptidase family protein | - |
| HAS68_RS00790 (HAS68_0112) | comYA | 123465..124415 (+) | 951 | WP_002936562.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| HAS68_RS00795 (HAS68_0113) | comYB | 124327..125364 (+) | 1038 | WP_255195823.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| HAS68_RS00800 (HAS68_0114) | comYC | 125366..125647 (+) | 282 | WP_009909092.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| HAS68_RS00805 (HAS68_0115) | comGD | 125628..126035 (+) | 408 | WP_009909093.1 | competence type IV pilus minor pilin ComGD | - |
| HAS68_RS00810 (HAS68_0116) | comYE | 126007..126300 (+) | 294 | WP_009909095.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| HAS68_RS00815 (HAS68_0117) | comGF/cglF | 126287..126721 (+) | 435 | WP_009909097.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| HAS68_RS00820 (HAS68_0118) | comGG | 126699..127109 (+) | 411 | WP_009909099.1 | competence type IV pilus minor pilin ComGG | - |
| HAS68_RS00825 (HAS68_0119) | comYH | 127166..128119 (+) | 954 | WP_024409299.1 | class I SAM-dependent methyltransferase | Machinery gene |
| HAS68_RS00830 (HAS68_0120) | - | 128169..129356 (+) | 1188 | WP_013730078.1 | acetate kinase | - |
| HAS68_RS00835 (HAS68_0121) | - | 129670..130266 (+) | 597 | WP_009909104.1 | folate family ECF transporter S component | - |
| HAS68_RS00840 (HAS68_0122) | - | 130277..131533 (+) | 1257 | WP_013730079.1 | folylpolyglutamate synthase/dihydrofolate synthase family protein | - |
| HAS68_RS00845 (HAS68_0123) | pepA | 131579..132640 (-) | 1062 | WP_002936538.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35807.97 Da Isoelectric Point: 4.4571
>NTDB_id=111586 HAS68_RS00825 WP_024409299.1 127166..128119(+) (comYH) [Streptococcus suis 05HAS68]
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVANQHEMDLVVNNNKTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLMPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVANQHEMDLVVNNNKTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLMPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
Nucleotide
Download Length: 954 bp
>NTDB_id=111586 HAS68_RS00825 WP_024409299.1 127166..128119(+) (comYH) [Streptococcus suis 05HAS68]
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTAATCAGCATGAGATGGACCTTGTTGTCAATAATAACA
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTATCAATTCTTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTACAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGATGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGCTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTGAAATATCTGGAAAAAGATGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTAATCAGCATGAGATGGACCTTGTTGTCAATAATAACA
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTATCAATTCTTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTACAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGATGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGCTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTGAAATATCTGGAAAAAGATGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
60.759 |
99.685 |
0.606 |
| comYH | Streptococcus mutans UA159 |
60.443 |
99.685 |
0.603 |