Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | TTHNP4_RS09550 | Genome accession | NZ_LR027517 |
| Coordinates | 1714138..1714446 (-) | Length | 102 a.a. |
| NCBI ID | WP_041444468.1 | Uniprot ID | - |
| Organism | Thermus thermophilus isolate TTHNAR1 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1709138..1719446
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TTHNP4_RS09530 (TTHN1_01920) | rsmG | 1709835..1710584 (+) | 750 | WP_124105235.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | - |
| TTHNP4_RS09535 (TTHN1_01921) | soj | 1710578..1711327 (+) | 750 | WP_124105236.1 | chromosome-partitioning ATPase Soj | - |
| TTHNP4_RS09540 (TTHN1_01922) | - | 1711311..1712120 (+) | 810 | WP_124105237.1 | ParB/RepB/Spo0J family partition protein | - |
| TTHNP4_RS09545 (TTHN1_01923) | comA/comEC | 1712108..1714141 (-) | 2034 | WP_124105238.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| TTHNP4_RS09550 (TTHN1_01924) | comEA | 1714138..1714446 (-) | 309 | WP_041444468.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| TTHNP4_RS14735 (TTHN1_01925) | - | 1714419..1714580 (-) | 162 | WP_252973357.1 | hypothetical protein | - |
| TTHNP4_RS09555 (TTHN1_01926) | - | 1714565..1715044 (-) | 480 | WP_252973358.1 | YcxB family protein | - |
| TTHNP4_RS09560 (TTHN1_01927) | - | 1715077..1715604 (+) | 528 | WP_011173971.1 | inorganic diphosphatase | - |
| TTHNP4_RS09565 (TTHN1_01928) | - | 1715668..1716162 (+) | 495 | WP_124105239.1 | TFIIB-type zinc ribbon-containing protein | - |
| TTHNP4_RS09570 (TTHN1_01929) | rsmI | 1716164..1716958 (+) | 795 | WP_124105240.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| TTHNP4_RS09575 (TTHN1_01930) | pfkA | 1716955..1717923 (+) | 969 | WP_124105241.1 | 6-phosphofructokinase | - |
| TTHNP4_RS09580 (TTHN1_01931) | - | 1717900..1718364 (-) | 465 | WP_011229049.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 102 a.a. Molecular weight: 10933.21 Da Isoelectric Point: 10.3435
>NTDB_id=1115732 TTHNP4_RS09550 WP_041444468.1 1714138..1714446(-) (comEA) [Thermus thermophilus isolate TTHNAR1]
MVLGYLVAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
MVLGYLVAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
Nucleotide
Download Length: 309 bp
>NTDB_id=1115732 TTHNP4_RS09550 WP_041444468.1 1714138..1714446(-) (comEA) [Thermus thermophilus isolate TTHNAR1]
CTGGTCCTCGGCTACCTCGTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAGGCCCTGGGAAAGGTCGCCCCTTTGCCCCAGGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTGGCCCGGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTCCTCAAGGTGAAAGGGATCGGCCCCGCCACCCTGGAGCGCCTCCGCCCCTACCTCCGGCCATGA
CTGGTCCTCGGCTACCTCGTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAGGCCCTGGGAAAGGTCGCCCCTTTGCCCCAGGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTGGCCCGGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTCCTCAAGGTGAAAGGGATCGGCCCCGCCACCCTGGAGCGCCTCCGCCCCTACCTCCGGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Thermus thermophilus HB27 |
99.02 |
100 |
0.99 |