Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   BAMMD1_RS05380 Genome accession   NZ_LN999829
Coordinates   1077039..1077230 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain B25     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1072039..1082230
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAMMD1_RS05345 (BAMMD1_1049) argF 1072891..1073862 (+) 972 WP_015388451.1 ornithine carbamoyltransferase -
  BAMMD1_RS05350 (BAMMD1_1050) - 1073938..1074117 (+) 180 WP_003155070.1 YjzC family protein -
  BAMMD1_RS05355 (BAMMD1_1051) - 1074154..1074339 (-) 186 WP_003155069.1 YjzD family protein -
  BAMMD1_RS05365 (BAMMD1_1052) - 1074600..1075334 (+) 735 WP_060386862.1 hypothetical protein -
  BAMMD1_RS05370 (BAMMD1_1053) - 1075417..1075983 (+) 567 WP_003155065.1 hypothetical protein -
  BAMMD1_RS05375 (BAMMD1_1054) med 1076073..1077026 (+) 954 WP_044053096.1 BMP family ABC transporter substrate-binding protein Regulator
  BAMMD1_RS05380 (BAMMD1_1055) comZ 1077039..1077230 (+) 192 WP_003155061.1 ComZ family protein Regulator
  BAMMD1_RS05385 (BAMMD1_1056) - 1077260..1077478 (-) 219 WP_044053097.1 hypothetical protein -
  BAMMD1_RS05390 (BAMMD1_1057) - 1077646..1078584 (+) 939 WP_044053098.1 beta-ketoacyl-ACP synthase III -
  BAMMD1_RS05395 (BAMMD1_1058) fabF 1078607..1079845 (+) 1239 WP_003155056.1 beta-ketoacyl-ACP synthase II -
  BAMMD1_RS05400 (BAMMD1_1059) - 1079929..1080714 (+) 786 WP_060386863.1 DUF2268 domain-containing protein -
  BAMMD1_RS05405 (BAMMD1_1060) - 1080888..1081874 (+) 987 WP_060386864.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=1115407 BAMMD1_RS05380 WP_003155061.1 1077039..1077230(+) (comZ) [Bacillus velezensis strain B25]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=1115407 BAMMD1_RS05380 WP_003155061.1 1077039..1077230(+) (comZ) [Bacillus velezensis strain B25]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment