Detailed information NTG1115406

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: BAMMD1_RS05375
• Genome accession: NZ_LN999829
• Coordinates: 1076073..1077026 (+)
• Length: 317 a.a.
• NCBI ID: WP_044053096.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain B25
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1071073..1082026

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAMMD1_RS05345 (BAMMD1_1049)	argF	1072891..1073862 (+)	972	WP_015388451.1	ornithine carbamoyltransferase	-
BAMMD1_RS05350 (BAMMD1_1050)	-	1073938..1074117 (+)	180	WP_003155070.1	YjzC family protein	-
BAMMD1_RS05355 (BAMMD1_1051)	-	1074154..1074339 (-)	186	WP_003155069.1	YjzD family protein	-
BAMMD1_RS05365 (BAMMD1_1052)	-	1074600..1075334 (+)	735	WP_060386862.1	hypothetical protein	-
BAMMD1_RS05370 (BAMMD1_1053)	-	1075417..1075983 (+)	567	WP_003155065.1	hypothetical protein	-
BAMMD1_RS05375 (BAMMD1_1054)	med	1076073..1077026 (+)	954	WP_044053096.1	BMP family ABC transporter substrate-binding protein	Regulator
BAMMD1_RS05380 (BAMMD1_1055)	comZ	1077039..1077230 (+)	192	WP_003155061.1	ComZ family protein	Regulator
BAMMD1_RS05385 (BAMMD1_1056)	-	1077260..1077478 (-)	219	WP_044053097.1	hypothetical protein	-
BAMMD1_RS05390 (BAMMD1_1057)	-	1077646..1078584 (+)	939	WP_044053098.1	beta-ketoacyl-ACP synthase III	-
BAMMD1_RS05395 (BAMMD1_1058)	fabF	1078607..1079845 (+)	1239	WP_003155056.1	beta-ketoacyl-ACP synthase II	-
BAMMD1_RS05400 (BAMMD1_1059)	-	1079929..1080714 (+)	786	WP_060386863.1	DUF2268 domain-containing protein	-
BAMMD1_RS05405 (BAMMD1_1060)	-	1080888..1081874 (+)	987	WP_060386864.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35375.97 Da
• Isoelectric Point: 4.5594

>NTDB_id=1115406 BAMMD1_RS05375 WP_044053096.1 1076073..1077026(+) (med) [Bacillus velezensis strain B25]
MITRLVMIFSVLLLLSGCTQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKTIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHDFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNQTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=1115406 BAMMD1_RS05375 WP_044053096.1 1076073..1077026(+) (med) [Bacillus velezensis strain B25]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCACACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTCCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAACGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCACCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAACCAATGAGGTCGGTGTCATCGCCTCTTTTCTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACGACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCGCTGGTGGACA
AAGCGTTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAATCAAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.233	100	0.782