Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ABR2091_RS07950 | Genome accession | NZ_LN997846 |
| Coordinates | 1706894..1707274 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii isolate R2091 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1701894..1712274
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABR2091_RS07920 (ABR2091_1595) | kdsB | 1702797..1703558 (+) | 762 | WP_000680704.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ABR2091_RS07925 (ABR2091_1596) | - | 1703570..1704550 (+) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| ABR2091_RS07930 (ABR2091_1597) | - | 1704562..1704903 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ABR2091_RS07935 (ABR2091_1598) | - | 1704921..1705694 (+) | 774 | WP_000497303.1 | TatD family hydrolase | - |
| ABR2091_RS07940 (ABR2091_1599) | - | 1705732..1706340 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ABR2091_RS07945 (ABR2091_1600) | - | 1706350..1706904 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ABR2091_RS07950 (ABR2091_1601) | xcpV | 1706894..1707274 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ABR2091_RS07955 (ABR2091_1602) | xcpW | 1707274..1707975 (+) | 702 | WP_000594576.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ABR2091_RS07960 (ABR2091_1603) | gspK | 1707975..1708934 (+) | 960 | WP_000301464.1 | type II secretion system minor pseudopilin GspK | - |
| ABR2091_RS07965 (ABR2091_1604) | - | 1709164..1709760 (+) | 597 | WP_000908453.1 | 6-carboxytetrahydropterin synthase | - |
| ABR2091_RS07970 (ABR2091_1605) | ung | 1709811..1710524 (+) | 714 | WP_001177530.1 | uracil-DNA glycosylase | - |
| ABR2091_RS07975 (ABR2091_1606) | - | 1710521..1711645 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ABR2091_RS07980 (ABR2091_1607) | tadA | 1711652..1712155 (+) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1115351 ABR2091_RS07950 WP_000836911.1 1706894..1707274(+) (xcpV) [Acinetobacter baumannii isolate R2091]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1115351 ABR2091_RS07950 WP_000836911.1 1706894..1707274(+) (xcpV) [Acinetobacter baumannii isolate R2091]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTTGCAGCTGTCGCTTTAACTAA
AGTTGCAATGCAGTACACTCAGTCTACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTTGCAGCTGTCGCTTTAACTAA
AGTTGCAATGCAGTACACTCAGTCTACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |