Detailed information NTG1115352

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ABR2091_RS07955
• Genome accession: NZ_LN997846
• Coordinates: 1707274..1707975 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594576.1
• Uniprot ID: A0A429LRQ6
• Organism: Acinetobacter baumannii isolate R2091
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1702274..1712975

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABR2091_RS07920 (ABR2091_1595)	kdsB	1702797..1703558 (+)	762	WP_000680704.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ABR2091_RS07925 (ABR2091_1596)	-	1703570..1704550 (+)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
ABR2091_RS07930 (ABR2091_1597)	-	1704562..1704903 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
ABR2091_RS07935 (ABR2091_1598)	-	1704921..1705694 (+)	774	WP_000497303.1	TatD family hydrolase	-
ABR2091_RS07940 (ABR2091_1599)	-	1705732..1706340 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ABR2091_RS07945 (ABR2091_1600)	-	1706350..1706904 (+)	555	WP_000841373.1	type II secretion system protein	-
ABR2091_RS07950 (ABR2091_1601)	xcpV	1706894..1707274 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ABR2091_RS07955 (ABR2091_1602)	xcpW	1707274..1707975 (+)	702	WP_000594576.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ABR2091_RS07960 (ABR2091_1603)	gspK	1707975..1708934 (+)	960	WP_000301464.1	type II secretion system minor pseudopilin GspK	-
ABR2091_RS07965 (ABR2091_1604)	-	1709164..1709760 (+)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
ABR2091_RS07970 (ABR2091_1605)	ung	1709811..1710524 (+)	714	WP_001177530.1	uracil-DNA glycosylase	-
ABR2091_RS07975 (ABR2091_1606)	-	1710521..1711645 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ABR2091_RS07980 (ABR2091_1607)	tadA	1711652..1712155 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
ABR2091_RS07985 (ABR2091_1608)	-	1712225..1712668 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26643.61 Da
• Isoelectric Point: 9.5501

>NTDB_id=1115352 ABR2091_RS07955 WP_000594576.1 1707274..1707975(+) (xcpW) [Acinetobacter baumannii isolate R2091]
MIKNKYIHIRSFASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEINIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1115352 ABR2091_RS07955 WP_000594576.1 1707274..1707975(+) (xcpW) [Acinetobacter baumannii isolate R2091]
ATGATAAAAAATAAATATATTCACATCCGCAGCTTTGCTTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGATTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A429LRQ6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991