Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   A66_RS05535 Genome accession   NZ_LN847353
Coordinates   1073580..1074389 (-) Length   269 a.a.
NCBI ID   WP_001289493.1    Uniprot ID   Q9RCS5
Organism   Streptococcus pneumoniae strain A66     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1068580..1079389
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A66_RS05520 (A66_01103) - 1071045..1072916 (-) 1872 WP_053039627.1 Eco57I restriction-modification methylase domain-containing protein -
  A66_RS05525 (A66_01104) - 1072991..1073245 (-) 255 WP_001809704.1 type II toxin-antitoxin system RelE/ParE family toxin -
  A66_RS05530 (A66_01105) relB 1073247..1073489 (-) 243 WP_000208080.1 type II toxin-antitoxin system RelB family antitoxin -
  A66_RS05535 (A66_01106) vicX 1073580..1074389 (-) 810 WP_001289493.1 MBL fold metallo-hydrolase Regulator
  A66_RS05540 (A66_01107) micB 1074391..1075740 (-) 1350 WP_000886210.1 cell wall metabolism sensor histidine kinase VicK Regulator
  A66_RS05545 (A66_01108) micA 1075733..1076437 (-) 705 WP_053039628.1 response regulator YycF Regulator
  A66_RS05550 (A66_01109) mutY 1076493..1077668 (-) 1176 WP_000886145.1 A/G-specific adenine glycosylase -
  A66_RS12780 (A66_01110) - 1077765..1077890 (+) 126 WP_001818232.1 hypothetical protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29916.89 Da        Isoelectric Point: 6.1743

>NTDB_id=1114569 A66_RS05535 WP_001289493.1 1073580..1074389(-) (vicX) [Streptococcus pneumoniae strain A66]
MSEIGFKYSILASGSSGNSFYLETSKKKLLVDAGLSGKKITSLLAEINRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEKTWQAMENSKYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRFMKDDKSFVLLTDTGYVSDRMAG
IVENADGYLIEANHDVEILRSGSYAWRLKQRILSDLGHLSNEDGAEAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVN
QLAQADLGVGVDFKVYDTSPDTATPLTEI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1114569 A66_RS05535 WP_001289493.1 1073580..1074389(-) (vicX) [Streptococcus pneumoniae strain A66]
ATGAGTGAAATAGGCTTTAAATACAGTATTTTAGCGTCGGGTTCCAGTGGAAATTCTTTTTATCTGGAAACCTCAAAAAA
GAAGCTTTTAGTGGATGCAGGCTTGTCTGGCAAGAAAATTACCAGTCTGCTAGCTGAAATTAACCGCAAGCCAGAAGACC
TGGATGCCATCTTGATTACCCATGAGCATTCAGATCATATCCATGGAGTAGGCGTTTTGGCTCGCAAGTATGGTATGGAT
CTTTATGCCAATGAAAAGACCTGGCAAGCTATGGAAAATAGTAAATATCTTGGCAAGGTGGATTCTTCGCAAAAGCATAT
TTTTGAAATGGGTAAAACCAAAACTTTTGGAGATATCGACATCGAGAGTTTTGGTGTAAGCCATGATGCAGTCGCACCGC
AGTTCTATCGCTTTATGAAGGATGACAAGAGTTTTGTCCTTTTGACAGATACAGGTTATGTCAGTGACCGTATGGCGGGC
ATTGTCGAAAATGCGGATGGCTATCTTATCGAGGCCAACCATGATGTAGAAATTTTGCGATCAGGTTCTTACGCTTGGCG
ACTCAAACAACGAATCCTATCTGACCTTGGTCACCTTTCTAACGAGGACGGTGCTGAAGCTATGATTCGGACGCTAGGAA
ATCGTACTAAGAAGATTTACCTTGGGCATTTATCTAAGGAAAATAATATCAAGGAACTGGCTCATATGACCATGGTCAAT
CAGCTGGCTCAAGCTGATCTGGGAGTCGGAGTAGACTTTAAGGTTTATGATACCTCACCAGATACCGCAACACCATTGAC
AGAGATATAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9RCS5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.323

100

0.773

Multiple sequence alignment