Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   A66_RS00035 Genome accession   NZ_LN847353
Coordinates   4514..5272 (+) Length   252 a.a.
NCBI ID   WP_000410378.1    Uniprot ID   A0A064C0A8
Organism   Streptococcus pneumoniae strain A66     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1..10272
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A66_RS00005 (A66_00001) comE 111..863 (-) 753 WP_053039410.1 competence system response regulator transcription factor ComE Regulator
  A66_RS00010 (A66_00002) comD/comD2 860..2185 (-) 1326 WP_000364846.1 competence system sensor histidine kinase ComD Regulator
  A66_RS00015 (A66_00003) comC/comC2 2206..2331 (-) 126 WP_000799686.1 competence-stimulating peptide ComC Regulator
  A66_RS00025 (A66_00004) rlmH 2613..3092 (-) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  A66_RS00030 (A66_00005) htrA 3275..4456 (+) 1182 WP_000681598.1 S1C family serine protease Regulator
  A66_RS00035 (A66_00006) spo0J 4514..5272 (+) 759 WP_000410378.1 ParB/RepB/Spo0J family partition protein Regulator
  A66_RS00040 (A66_00007) dnaA 5485..6846 (+) 1362 WP_000660618.1 chromosomal replication initiator protein DnaA -
  A66_RS00045 (A66_00008) dnaN 7005..8141 (+) 1137 WP_000581157.1 DNA polymerase III subunit beta -
  A66_RS00050 (A66_00009) - 8206..8400 (+) 195 WP_000285194.1 DUF951 domain-containing protein -
  A66_RS00055 (A66_00010) ychF 8484..9599 (+) 1116 WP_001218707.1 redox-regulated ATPase YchF -
  A66_RS00060 (A66_00011) pth 9670..10239 (+) 570 WP_000163932.1 aminoacyl-tRNA hydrolase -

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29153.50 Da        Isoelectric Point: 9.0667

>NTDB_id=1114546 A66_RS00035 WP_000410378.1 4514..5272(+) (spo0J) [Streptococcus pneumoniae strain A66]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=1114546 A66_RS00035 WP_000410378.1 4514..5272(+) (spo0J) [Streptococcus pneumoniae strain A66]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAGAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTTTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
ATTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A064C0A8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508

Multiple sequence alignment