Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   AT689_RS02670 Genome accession   NZ_LN831051
Coordinates   497386..498144 (-) Length   252 a.a.
NCBI ID   WP_000410378.1    Uniprot ID   A0A064C0A8
Organism   Streptococcus pneumoniae strain NCTC7465     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 492386..503144
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AT689_RS02645 (ERS445053_00522) pth 492419..492988 (-) 570 WP_000163932.1 aminoacyl-tRNA hydrolase -
  AT689_RS02650 (ERS445053_00523) ychF 493059..494174 (-) 1116 WP_001218707.1 redox-regulated ATPase YchF -
  AT689_RS02655 (ERS445053_00524) - 494258..494452 (-) 195 WP_000285191.1 DUF951 domain-containing protein -
  AT689_RS02660 (ERS445053_00525) dnaN 494517..495653 (-) 1137 WP_000581157.1 DNA polymerase III subunit beta -
  AT689_RS02665 (ERS445053_00526) dnaA 495812..497173 (-) 1362 WP_000660615.1 chromosomal replication initiator protein DnaA -
  AT689_RS02670 (ERS445053_00527) spo0J 497386..498144 (-) 759 WP_000410378.1 ParB/RepB/Spo0J family partition protein Regulator
  AT689_RS02675 (ERS445053_00528) htrA 498202..499383 (-) 1182 WP_000681597.1 S1C family serine protease Regulator
  AT689_RS02680 (ERS445053_00529) rlmH 499566..500045 (+) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  AT689_RS02690 (ERS445053_00531) comC/comC1 500327..500452 (+) 126 WP_000799689.1 competence-stimulating peptide ComC Regulator
  AT689_RS02695 (ERS445053_00532) comD/comD1 500473..501798 (+) 1326 WP_000362880.1 competence system sensor histidine kinase ComD Regulator
  AT689_RS02700 (ERS445053_00533) comE 501795..502547 (+) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29153.50 Da        Isoelectric Point: 9.0667

>NTDB_id=1114352 AT689_RS02670 WP_000410378.1 497386..498144(-) (spo0J) [Streptococcus pneumoniae strain NCTC7465]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=1114352 AT689_RS02670 WP_000410378.1 497386..498144(-) (spo0J) [Streptococcus pneumoniae strain NCTC7465]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTTTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
ATTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A064C0A8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508

Multiple sequence alignment