Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | ABBFA_RS01765 | Genome accession | NZ_CP001172 |
| Coordinates | 369918..370391 (+) | Length | 157 a.a. |
| NCBI ID | WP_001214060.1 | Uniprot ID | A0A0J0ZM89 |
| Organism | Acinetobacter baumannii AB307-0294 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 364918..375391
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABBFA_RS01740 (ABBFA_00338) | - | 365381..367486 (-) | 2106 | WP_001117590.1 | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | - |
| ABBFA_RS01745 | - | 367526..367656 (-) | 131 | Protein_330 | hypothetical protein | - |
| ABBFA_RS01750 (ABBFA_00339) | rpoZ | 367695..367973 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| ABBFA_RS01755 (ABBFA_00340) | gmk | 368046..368675 (-) | 630 | WP_000015937.1 | guanylate kinase | - |
| ABBFA_RS01760 (ABBFA_00341) | ispH | 368798..369748 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| ABBFA_RS01765 (ABBFA_00342) | fimU | 369918..370391 (+) | 474 | WP_001214060.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| ABBFA_RS01770 (ABBFA_00343) | pilV | 370385..370945 (+) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| ABBFA_RS01775 (ABBFA_00344) | pilW | 370946..371947 (+) | 1002 | WP_000079197.1 | PilW family protein | Machinery gene |
| ABBFA_RS01780 (ABBFA_00345) | pilX | 371944..372762 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16883.50 Da Isoelectric Point: 8.5355
>NTDB_id=111431 ABBFA_RS01765 WP_001214060.1 369918..370391(+) (fimU) [Acinetobacter baumannii AB307-0294]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTSTLAFNANGVVANITQDTLLSICNFRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTSTLAFNANGVVANITQDTLLSICNFRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=111431 ABBFA_RS01765 WP_001214060.1 369918..370391(+) (fimU) [Acinetobacter baumannii AB307-0294]
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTAGCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTTTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTAGCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTTTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
98.726 |
100 |
0.987 |