Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | ABBFA_RS01660 | Genome accession | NZ_CP001172 |
| Coordinates | 345821..346348 (+) | Length | 175 a.a. |
| NCBI ID | WP_000695059.1 | Uniprot ID | A0A0D5YDP9 |
| Organism | Acinetobacter baumannii AB307-0294 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 340821..351348
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABBFA_RS01645 (ABBFA_00319) | pilM | 343374..344432 (+) | 1059 | WP_002014066.1 | pilus assembly protein PilM | Machinery gene |
| ABBFA_RS01650 (ABBFA_00320) | pilN | 344432..345073 (+) | 642 | WP_000201229.1 | PilN domain-containing protein | Machinery gene |
| ABBFA_RS01655 (ABBFA_00321) | pilO | 345070..345810 (+) | 741 | WP_000076101.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| ABBFA_RS01660 (ABBFA_00322) | pilP | 345821..346348 (+) | 528 | WP_000695059.1 | pilus assembly protein PilP | Machinery gene |
| ABBFA_RS01665 (ABBFA_00323) | pilQ | 346411..348576 (+) | 2166 | WP_001017040.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| ABBFA_RS01670 (ABBFA_00324) | aroK | 348588..349157 (+) | 570 | WP_000643712.1 | shikimate kinase AroK | - |
| ABBFA_RS01675 (ABBFA_00325) | aroB | 349186..350268 (+) | 1083 | WP_001193997.1 | 3-dehydroquinate synthase | - |
| ABBFA_RS01680 (ABBFA_00326) | - | 350284..351159 (+) | 876 | WP_000218810.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19371.59 Da Isoelectric Point: 9.0270
>NTDB_id=111429 ABBFA_RS01660 WP_000695059.1 345821..346348(+) (pilP) [Acinetobacter baumannii AB307-0294]
MKIKQITLCVLASVVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
MKIKQITLCVLASVVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=111429 ABBFA_RS01660 WP_000695059.1 345821..346348(+) (pilP) [Acinetobacter baumannii AB307-0294]
ATGAAAATTAAGCAAATTACTCTTTGTGTTTTGGCGAGTGTTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTTGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GTATGAATCAGGGCCGTATCACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCGGATGGTCGAGAAGGC
TATGTCGAAAGACCGAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA
ATGAAAATTAAGCAAATTACTCTTTGTGTTTTGGCGAGTGTTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTTGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GTATGAATCAGGGCCGTATCACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCGGATGGTCGAGAAGGC
TATGTCGAAAGACCGAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
98.286 |
100 |
0.983 |
| comL | Acinetobacter baylyi ADP1 |
71.839 |
99.429 |
0.714 |