Detailed information
Bioinformatically predicted
Overview
| Name | rocC | Type | Regulator |
| Locus tag | LHA_RS01220 | Genome accession | NZ_LN681225 |
| Coordinates | 267196..267840 (-) | Length | 214 a.a. |
| NCBI ID | WP_045104926.1 | Uniprot ID | A0A0A8UKI6 |
| Organism | Legionella hackeliae strain ATCC 35250 | ||
| Function | rocR chaperone; repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 262196..272840
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LHA_RS01205 (LHA_0270) | gap | 263595..264587 (+) | 993 | WP_045104923.1 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| LHA_RS01210 (LHA_0271) | - | 264599..265786 (+) | 1188 | WP_045104924.1 | phosphoglycerate kinase | - |
| LHA_RS01215 (LHA_0272) | pyk | 265770..267188 (+) | 1419 | WP_045104925.1 | pyruvate kinase | - |
| LHA_RS01220 (LHA_0273) | rocC | 267196..267840 (-) | 645 | WP_045104926.1 | ProQ/FinO family protein | Regulator |
| LHA_RS01225 (LHA_0275) | - | 268120..268335 (+) | 216 | WP_045104927.1 | hypothetical protein | - |
| LHA_RS01230 (LHA_0276) | dapB | 268361..269092 (+) | 732 | WP_045104928.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| LHA_RS01235 (LHA_0277) | - | 269141..270952 (-) | 1812 | WP_045104929.1 | hypothetical protein | - |
| LHA_RS01240 (LHA_0278) | - | 271063..271860 (-) | 798 | WP_052673549.1 | sulfite exporter TauE/SafE family protein | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 23839.48 Da Isoelectric Point: 10.9763
>NTDB_id=1113911 LHA_RS01220 WP_045104926.1 267196..267840(-) (rocC) [Legionella hackeliae strain ATCC 35250]
MRRQELHPRTAVLNKAQKNKSKKARNEALLWLAATFPHAFDNSLRIRPLKIGIMDDILAVADEAAKHGISKSKLREAVVI
FTRRIDYLTCLKAREMRVDLAGNPVSVVTEDEAEKAATKIKKRVEKSVRNARKQLPAKSTSSTYSSSKSPAQSQESVTPY
FPERAPAFSAQNPITPARAAVVVKHKPSRQFDPDAVARLKEKLGLSRKAQETTD
MRRQELHPRTAVLNKAQKNKSKKARNEALLWLAATFPHAFDNSLRIRPLKIGIMDDILAVADEAAKHGISKSKLREAVVI
FTRRIDYLTCLKAREMRVDLAGNPVSVVTEDEAEKAATKIKKRVEKSVRNARKQLPAKSTSSTYSSSKSPAQSQESVTPY
FPERAPAFSAQNPITPARAAVVVKHKPSRQFDPDAVARLKEKLGLSRKAQETTD
Nucleotide
Download Length: 645 bp
>NTDB_id=1113911 LHA_RS01220 WP_045104926.1 267196..267840(-) (rocC) [Legionella hackeliae strain ATCC 35250]
ATGAGAAGGCAAGAACTTCATCCACGCACAGCAGTGCTCAATAAGGCACAAAAAAATAAATCCAAAAAAGCCCGTAATGA
AGCATTATTGTGGCTTGCTGCGACATTCCCTCATGCCTTTGATAATAGCTTAAGGATTCGCCCACTAAAGATAGGTATTA
TGGATGATATCCTAGCTGTAGCCGATGAAGCAGCTAAACATGGTATTTCTAAGAGCAAATTGCGAGAAGCTGTCGTAATT
TTCACGCGCCGCATTGATTATTTGACCTGTCTTAAAGCTCGCGAAATGCGTGTTGATTTGGCTGGAAATCCCGTCAGCGT
TGTGACTGAAGATGAAGCCGAAAAAGCAGCTACAAAAATTAAAAAAAGGGTGGAAAAAAGTGTGCGAAATGCTCGAAAGC
AACTTCCTGCCAAATCAACGTCCTCTACTTATTCAAGCTCTAAATCACCTGCTCAATCTCAAGAATCGGTGACTCCTTAT
TTTCCTGAGCGAGCGCCAGCGTTTAGCGCCCAAAATCCAATTACTCCAGCACGCGCTGCTGTTGTAGTGAAGCACAAACC
CTCCAGGCAATTTGATCCTGATGCGGTTGCCCGATTAAAAGAGAAATTAGGCTTATCGCGTAAGGCACAGGAAACTACGG
ATTAA
ATGAGAAGGCAAGAACTTCATCCACGCACAGCAGTGCTCAATAAGGCACAAAAAAATAAATCCAAAAAAGCCCGTAATGA
AGCATTATTGTGGCTTGCTGCGACATTCCCTCATGCCTTTGATAATAGCTTAAGGATTCGCCCACTAAAGATAGGTATTA
TGGATGATATCCTAGCTGTAGCCGATGAAGCAGCTAAACATGGTATTTCTAAGAGCAAATTGCGAGAAGCTGTCGTAATT
TTCACGCGCCGCATTGATTATTTGACCTGTCTTAAAGCTCGCGAAATGCGTGTTGATTTGGCTGGAAATCCCGTCAGCGT
TGTGACTGAAGATGAAGCCGAAAAAGCAGCTACAAAAATTAAAAAAAGGGTGGAAAAAAGTGTGCGAAATGCTCGAAAGC
AACTTCCTGCCAAATCAACGTCCTCTACTTATTCAAGCTCTAAATCACCTGCTCAATCTCAAGAATCGGTGACTCCTTAT
TTTCCTGAGCGAGCGCCAGCGTTTAGCGCCCAAAATCCAATTACTCCAGCACGCGCTGCTGTTGTAGTGAAGCACAAACC
CTCCAGGCAATTTGATCCTGATGCGGTTGCCCGATTAAAAGAGAAATTAGGCTTATCGCGTAAGGCACAGGAAACTACGG
ATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rocC | Legionella pneumophila str. Paris |
63.043 |
100 |
0.678 |