Detailed information NTG1113660

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: LMI_RS12910
• Genome accession: NZ_LN614830
• Coordinates: 2895403..2896467 (-)
• Length: 354 a.a.
• NCBI ID: WP_045100155.1
• Uniprot ID: A0A098GHQ6
• Organism: Legionella micdadei strain ATCC 33218
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2890403..2901467

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LMI_RS12880 (LMI_2761)	-	2891043..2891228 (-)	186	WP_045100150.1	CBU_0585 family protein	-
LMI_RS12885 (LMI_2762)	-	2891338..2892315 (+)	978	WP_045100151.1	adenosine deaminase	-
LMI_RS12895 (LMI_2763)	rpoH	2892920..2893780 (-)	861	WP_045100153.1	RNA polymerase sigma factor RpoH	-
LMI_RS12900 (LMI_2764)	ftsX	2893841..2894770 (-)	930	WP_045100154.1	permease-like cell division protein FtsX	-
LMI_RS12905	ftsE	2894764..2895410 (-)	647	Protein_2532	cell division ATP-binding protein FtsE	-
LMI_RS12910 (LMI_2767)	pilA	2895403..2896467 (-)	1065	WP_045100155.1	signal recognition particle-docking protein FtsY	Machinery gene
LMI_RS12915 (LMI_2768)	-	2896529..2897851 (+)	1323	WP_045100156.1	pitrilysin family protein	-
LMI_RS12920 (LMI_2769)	-	2897848..2899173 (+)	1326	WP_082050751.1	pitrilysin family protein	-
LMI_RS12925 (LMI_2770)	rsmD	2899170..2899721 (+)	552	WP_045100157.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
LMI_RS12930 (LMI_2771)	dotD	2900024..2900473 (+)	450	WP_349267108.1	type IVB secretion system lipoprotein DotD	-
LMI_RS12935 (LMI_2772)	-	2900454..2901401 (+)	948	WP_045100159.1	type IV secretion system DotC family protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38794.45 Da
• Isoelectric Point: 6.7747

>NTDB_id=1113660 LMI_RS12910 WP_045100155.1 2895403..2896467(-) (pilA) [Legionella micdadei strain ATCC 33218]
MIKWFKRNQGETKPEEPLVEVSPVLTEEQHYEDKLAHSPAPSDESPKQGFFARIKRGLTKTRQQFGEGIGRLLLGKKEID
ASLLEELELVLLGADLGVETSQSILKQLGEGLARKQLTDGNAVFQELKRRLEAILLTSEKPLQLENPDKSPFVILTVGVN
GAGKTTSIGKMAKQFQQQGKKVMLAAGDTFRAAAVEQLQVWGERNQIPVIAQHTGADSASVIYDALQAAKARNIDILIAD
TAGRLHTQGNLMEELKKVKRVLQKLDANAPHETMLILDASIGQNALNQARQFHQSIGVTGITMTKLDGTAKGGILFAIAN
ELGIPFRYLGVGEGIDDLRPFDAQQFVRAIFNDD

Nucleotide

• Length: 1065 bp

>NTDB_id=1113660 LMI_RS12910 WP_045100155.1 2895403..2896467(-) (pilA) [Legionella micdadei strain ATCC 33218]
ATGATTAAATGGTTTAAAAGAAATCAAGGTGAAACTAAGCCTGAAGAACCTCTTGTTGAGGTTTCACCCGTACTTACTGA
AGAGCAGCATTATGAGGATAAATTAGCTCATTCGCCTGCCCCTAGTGATGAATCGCCAAAGCAAGGATTCTTTGCACGTA
TCAAGCGCGGATTGACTAAAACCCGCCAACAATTTGGTGAGGGGATTGGCCGATTATTACTTGGAAAAAAAGAGATCGAT
GCCTCTCTCTTGGAAGAGCTTGAACTCGTGTTGCTTGGTGCTGACCTAGGTGTTGAAACATCACAGTCTATCTTAAAGCA
ACTGGGCGAGGGTTTAGCAAGAAAGCAATTGACTGACGGGAATGCCGTCTTCCAAGAGTTAAAAAGGCGCCTGGAAGCTA
TCTTGTTAACTAGCGAAAAACCATTACAGTTAGAGAATCCTGATAAATCACCGTTTGTTATTTTAACCGTGGGCGTTAAT
GGAGCGGGTAAAACAACCTCTATTGGCAAAATGGCCAAACAATTCCAGCAGCAAGGTAAGAAAGTAATGCTCGCTGCAGG
AGATACTTTTCGTGCAGCAGCAGTTGAGCAGCTGCAAGTGTGGGGTGAGCGCAATCAGATACCTGTCATAGCACAACACA
CAGGAGCGGATAGTGCATCCGTGATTTACGATGCGCTGCAAGCGGCAAAAGCTAGAAATATTGATATTTTAATCGCGGAT
ACCGCTGGGCGCTTACACACTCAGGGAAATTTGATGGAAGAATTGAAAAAAGTGAAGCGGGTGTTACAAAAATTAGATGC
CAATGCCCCTCATGAAACCATGCTGATTTTAGACGCAAGTATTGGGCAAAATGCACTTAACCAGGCACGTCAATTTCATC
AATCCATTGGGGTAACAGGCATTACGATGACAAAGCTTGATGGAACTGCGAAAGGTGGGATTTTATTTGCTATCGCGAAT
GAATTAGGGATACCATTTCGTTACTTAGGTGTTGGTGAAGGAATTGACGATTTGCGTCCCTTTGATGCCCAGCAATTTGT
CAGAGCAATTTTTAATGATGATTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (66-128)

• SRP54-type protein, GTPase domain (SRP54) (151-351)

3D structure

• AlphaFold DB: A0A098GHQ6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	55.949	87.853	0.492