Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | LFA_RS14470 | Genome accession | NZ_LN614827 |
| Coordinates | 3459846..3460484 (+) | Length | 212 a.a. |
| NCBI ID | WP_084602200.1 | Uniprot ID | A0A098GAJ6 |
| Organism | Legionella fallonii LLAP-10 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3454846..3465484
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LFA_RS14455 (LFA_3163) | - | 3456365..3457813 (+) | 1449 | WP_045096808.1 | hypothetical protein | - |
| LFA_RS14460 (LFA_3164) | - | 3457974..3458840 (+) | 867 | WP_045096809.1 | polysaccharide deacetylase family protein | - |
| LFA_RS14465 (LFA_3165) | - | 3458982..3459497 (+) | 516 | WP_157010380.1 | hypothetical protein | - |
| LFA_RS14470 (LFA_3166) | fimT | 3459846..3460484 (+) | 639 | WP_084602200.1 | GspH/FimT family pseudopilin | Machinery gene |
| LFA_RS14475 (LFA_3167) | pilV | 3460495..3461028 (+) | 534 | WP_045096811.1 | type IV pilus modification protein PilV | - |
| LFA_RS14480 (LFA_3169) | - | 3461025..3462203 (+) | 1179 | WP_269447718.1 | PilW family protein | - |
| LFA_RS14485 (LFA_3170) | - | 3462200..3462730 (+) | 531 | WP_045096812.1 | pilus assembly protein | - |
Sequence
Protein
Download Length: 212 a.a. Molecular weight: 22521.97 Da Isoelectric Point: 8.4955
>NTDB_id=1113631 LFA_RS14470 WP_084602200.1 3459846..3460484(+) (fimT) [Legionella fallonii LLAP-10]
MLKNKVKIGVTNTNTLVSQCIVIRLLSFPTNNKEQPPLKIKVNAGFTLIELMVTLSVLCLLLVLAIPSFKSMMLNNRLIA
NTDSLVNALSYARSTALYQEISVVVCPLGSLNSTSCGGSWSSGWIVITQPASGTSTLLKSQQYSSNDPTLSSNVTSVTFD
AHGIATTQSNFKLCDNRGGTFATSVEVLATGFVQLGNTPGQAVWDNSALACP
MLKNKVKIGVTNTNTLVSQCIVIRLLSFPTNNKEQPPLKIKVNAGFTLIELMVTLSVLCLLLVLAIPSFKSMMLNNRLIA
NTDSLVNALSYARSTALYQEISVVVCPLGSLNSTSCGGSWSSGWIVITQPASGTSTLLKSQQYSSNDPTLSSNVTSVTFD
AHGIATTQSNFKLCDNRGGTFATSVEVLATGFVQLGNTPGQAVWDNSALACP
Nucleotide
Download Length: 639 bp
>NTDB_id=1113631 LFA_RS14470 WP_084602200.1 3459846..3460484(+) (fimT) [Legionella fallonii LLAP-10]
ATGTTAAAAAACAAAGTGAAAATTGGTGTAACAAACACCAATACTCTTGTGTCTCAATGCATAGTGATTCGCCTATTATC
ATTCCCTACAAACAACAAAGAACAACCTCCACTTAAAATCAAAGTCAACGCCGGATTTACCCTTATTGAACTGATGGTTA
CTTTAAGCGTATTGTGCTTGCTCTTAGTACTCGCCATCCCTTCTTTCAAAAGCATGATGCTAAACAATAGATTGATCGCT
AATACTGACTCATTAGTCAACGCACTTAGCTATGCACGTAGTACAGCACTTTATCAAGAAATAAGCGTAGTGGTATGTCC
TCTAGGCTCCTTAAACTCTACTAGCTGTGGCGGCAGCTGGAGTTCCGGATGGATAGTGATAACACAGCCTGCATCGGGAA
CTAGTACACTACTCAAAAGCCAACAATATTCTTCTAATGATCCAACATTGAGCAGCAATGTGACCAGTGTAACCTTCGAC
GCACATGGAATTGCCACTACTCAAAGTAATTTTAAACTATGTGACAACCGAGGAGGAACTTTTGCCACTTCAGTCGAAGT
GTTAGCTACAGGATTTGTCCAATTGGGAAACACTCCCGGCCAAGCAGTTTGGGATAATAGTGCTCTAGCATGTCCTTAG
ATGTTAAAAAACAAAGTGAAAATTGGTGTAACAAACACCAATACTCTTGTGTCTCAATGCATAGTGATTCGCCTATTATC
ATTCCCTACAAACAACAAAGAACAACCTCCACTTAAAATCAAAGTCAACGCCGGATTTACCCTTATTGAACTGATGGTTA
CTTTAAGCGTATTGTGCTTGCTCTTAGTACTCGCCATCCCTTCTTTCAAAAGCATGATGCTAAACAATAGATTGATCGCT
AATACTGACTCATTAGTCAACGCACTTAGCTATGCACGTAGTACAGCACTTTATCAAGAAATAAGCGTAGTGGTATGTCC
TCTAGGCTCCTTAAACTCTACTAGCTGTGGCGGCAGCTGGAGTTCCGGATGGATAGTGATAACACAGCCTGCATCGGGAA
CTAGTACACTACTCAAAAGCCAACAATATTCTTCTAATGATCCAACATTGAGCAGCAATGTGACCAGTGTAACCTTCGAC
GCACATGGAATTGCCACTACTCAAAGTAATTTTAAACTATGTGACAACCGAGGAGGAACTTTTGCCACTTCAGTCGAAGT
GTTAGCTACAGGATTTGTCCAATTGGGAAACACTCCCGGCCAAGCAGTTTGGGATAATAGTGCTCTAGCATGTCCTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Legionella pneumophila strain Lp02 |
63.068 |
83.019 |
0.524 |